EST details — SGN-E375273
| Search information |
| Request: 375273 | Match: SGN-E375273 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C180581 | Clone name: TUS-34-L19 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C180581 is on microarray TOM1 spot ID 1-1-6.4.19.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C31933 [cLEG-16-E2] | Trace: SGN-T66853 | EST: SGN-E252697 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C180581 [TUS-34-L19] | Trace: SGN-T187174 | EST: SGN-E375272 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E375273 | Length: 658 bp (889 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E375273 [] (trimmed)
TTGTTATATACAGGGGGTGGAGTTAGAGGGTAAGTTACGCATTTAGTCGTAACTTTAGTCAAACTTCGTAATAATTTAAAATTCAGAGTGGCCAT
TGTTGAAAGAGAGGGTGGAATTTGTAAGTCAAGAAACAGGTTACTCCTGTTTGAGTGAGGAAAAGTTGGTTTGCCTGTCTGTGGTCTTTTTATAA
TCTTTTTCTACAGAAGAGAAAGTGGGTAATTTTGTTTGAGAGTGGAAATATTCTCTAGTGGGAATCTACTAGGAGTAATTTATTTTCTATAAACT
AAGTAAAGTTTGGAAGGTGACAAAAAGAAAGACAAAAATCTTGGAATTGTTTTAGACAACCAAGGTTTTCTTGCTCAGAATGTCTGTTGCCTTGT
TATGGGTTGTTTCTCCTTGTGACGTCTCAAATGGGACAAGTTTCATGGAATCAGTCCGGGAGGGAAACCGTTTTTTTGATTCATCGAGGCATAGG
AATTTGGTGTCCAATGAGAGAATCAATAGAGGTGGTGGAAAGCAAACTAATAATGGACGGACATTTTCTGTACGGTCTGCTATTTTGGCTACTCC
ATCTGGAGAACGGACGATGACATCGGAACAGATGGTCTATGATGTGGTTTTGAGGCAGGCAGCCTTGGTGAAGACGCAACTGAGATCT
TGTTGAAAGAGAGGGTGGAATTTGTAAGTCAAGAAACAGGTTACTCCTGTTTGAGTGAGGAAAAGTTGGTTTGCCTGTCTGTGGTCTTTTTATAA
TCTTTTTCTACAGAAGAGAAAGTGGGTAATTTTGTTTGAGAGTGGAAATATTCTCTAGTGGGAATCTACTAGGAGTAATTTATTTTCTATAAACT
AAGTAAAGTTTGGAAGGTGACAAAAAGAAAGACAAAAATCTTGGAATTGTTTTAGACAACCAAGGTTTTCTTGCTCAGAATGTCTGTTGCCTTGT
TATGGGTTGTTTCTCCTTGTGACGTCTCAAATGGGACAAGTTTCATGGAATCAGTCCGGGAGGGAAACCGTTTTTTTGATTCATCGAGGCATAGG
AATTTGGTGTCCAATGAGAGAATCAATAGAGGTGGTGGAAAGCAAACTAATAATGGACGGACATTTTCTGTACGGTCTGCTATTTTGGCTACTCC
ATCTGGAGAACGGACGATGACATCGGAACAGATGGTCTATGATGTGGTTTTGAGGCAGGCAGCCTTGGTGAAGACGCAACTGAGATCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E375273] | SGN-U580527 | Tomato 200607 | Build 2 | 240 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T187175 [Download][View] | Facility Assigned ID: FA0AAD22CF10RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.944 | Expected Error Rate: 0.0060 | Quality Trim Threshold: 14.5 |
Working
