EST details — SGN-E396308
| Search information |
| Request: 396308 | Match: SGN-E396308 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C184427 | Clone name: TUS-44-M1 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C184427 is on microarray TOM1 spot ID 1-1-8.1.16.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184427 [TUS-44-M1] | Trace: SGN-T191907 | EST: SGN-E390581 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E396308 | Length: 672 bp (858 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E396308 [] (trimmed)
AGGATAAGAAATAGGGATAATCTATTTCTCTTATTCAGATAATTAGTAATTACACATAACACACAACTTTGATGCCCACATTATAATGATTAGCA
TGTCATTATATAAGTGTGCATCCTTTTATTTCATACATTAATTACTTAATTTTGGGCAATCCAGAAAATGGACAAGTCTAGAGTCACATTACAGG
GTACATATTTGCCTTGGGTTCATCACTCTCTCCTTCACATACAAACTTTCCATCTTTACCAAAATAATAGCAACCCTTGTACCCTGTGCAACATG
TGGTACATCCGGTGGGATAAATTAACGATTTTCCTTGTGAACGGGGACATCTTGAATAGGCAATATTTGGATCACAATTAAAGGTGCAAGCATTT
GGCCTTTTTGGATCAGATTCTCCTTCACAAATAAATTTTCCGAAAGAATTATAATAATTACAACCCTTATAGCCTGAGCAACAATTGATGCATAT
GGGATTTAGCGGACTTCCTTCTGAACGTGGGCATATCCCGAACCCAAGATTACCACATTCTCTAGTACAAGCCTTGGCATCAACATATAGAAACA
TTCCAAGAACAATTAGTAGGTAAGCGACAAAATTAACTTCCTTGTGAACAGCCATGATGGATAATTGATTACTAGTACCTTGTCTTCTTTTAATC
TGGTGCC
TGTCATTATATAAGTGTGCATCCTTTTATTTCATACATTAATTACTTAATTTTGGGCAATCCAGAAAATGGACAAGTCTAGAGTCACATTACAGG
GTACATATTTGCCTTGGGTTCATCACTCTCTCCTTCACATACAAACTTTCCATCTTTACCAAAATAATAGCAACCCTTGTACCCTGTGCAACATG
TGGTACATCCGGTGGGATAAATTAACGATTTTCCTTGTGAACGGGGACATCTTGAATAGGCAATATTTGGATCACAATTAAAGGTGCAAGCATTT
GGCCTTTTTGGATCAGATTCTCCTTCACAAATAAATTTTCCGAAAGAATTATAATAATTACAACCCTTATAGCCTGAGCAACAATTGATGCATAT
GGGATTTAGCGGACTTCCTTCTGAACGTGGGCATATCCCGAACCCAAGATTACCACATTCTCTAGTACAAGCCTTGGCATCAACATATAGAAACA
TTCCAAGAACAATTAGTAGGTAAGCGACAAAATTAACTTCCTTGTGAACAGCCATGATGGATAATTGATTACTAGTACCTTGTCTTCTTTTAATC
TGGTGCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E396308] | SGN-U578366 | Tomato 200607 | Build 2 | 209 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T197634 [Download][View] | Facility Assigned ID: FA0AAD32AG01FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0030 | Quality Trim Threshold: 12.5 |
Working
