This site uses cookies to provide logins and other features. Please accept the use of cookies by clicking Accept.
Tomato locus sucrose accumulator
Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
New Edit Delete
|
Locus | Solyc03g083910 |
Locus name | sucrose accumulator |
Symbol | sucr |
Gene activity | vacuolar acid invertase |
Description | the protein is present in the fruit of red fruited tomato species, which accumulate primarily hexoses, and absent in the green fruited species, which therefore accumulate sucroses. |
Chromosome | 3 |
Arm |
|
|
![]() ![]() |
sucrose accumulator is a TGRC gene
sucrose accumulator is on PhyloGenes
TomDelDB genotype frequencies in tomato populations. chromosome SL2.50ch03, position: 53853364
Please cite Razifard et al.
Registry name: | None | [Associate registry name] |
![]() ![]() | [Add notes, figures or images] |
Success
The display image was set successfully.
Image | Description | Type |
---|
![]() ![]() | [Associate accession] |
![]() ![]() | [Add new Allele] |
![]() ![]() | [Associate new locus] |
|
![]() ![]() | View sucrose accumulator relationships in the stand-alone network browser |
[loading...] | [Legend] [Levels] |
![]() ![]() |
![]() ![]() |
![]() ![]() |
![]() ![]() | unprocessed genomic sequence region underlying this gene |
>Solyc03g083910.2 SL2.50ch03:53855368..53851092 (sequence from reverse strand)
TTGGTCCCAGTCATTTTCTGTGTTCATCACCTATATATATAGCAGTAGACTAGTAGCTTCTCCCATTCCTCTATCTTCTA
TTATGGCCACTCAGTGTTATGACCCCGAAAACTCCGCCTCTCGTTACACATTACTCCCGGATCAACCCGATTCCGGCCAC
CGGAAGTCCCTTAAAATCATCTCCGGCATTTTCCTCTCCGTTTTCCTTTTGCTTTCTGTAGCCTTCTTTCCGATCCTCAA
CAACCAGTCACCGGACTTGCAAATCGACTCCCGTTCGCCGGCGCCGCCGTCAAGAGGTGTTTCTCAGGGAGTCTCCGATA
AAACTTTTCGAGATGTAGCCGGTGCTAGTCACGTTTCTTATGCGTGGTCCAATGCTATGCTTAGCTGGCAAAGAACGGCT
TACCATTTTCAACCTCAAAAAAATTGGATGAACGGTAATTAACTTTCTTATTTTGACTTTTCTTTAATTTCTTTTTTATT
TGATCTTAAAATTGAAATTATTTATAAATACTTATAACAGTTCTTTTTTTTCTCAATGATATTTATGGCTATTGATCTGT
TGGGGGTATCTTTTGGATTCTGATTGGATGCTATTCTGCAGATCCTAATGGTGAGTTCAAAGTTAATTATTATCACTATT
TTCTGCTAGTTTTTAATTAATTATATTCTTAAACTATGATTATAACTTTTAAAGCAATCTCATGAATGAGCAAATCATTA
ATTCGGGTGCTTATGTATATCATCTCGGTTAATCCTTTTACCTTATACTCAAAAACAAATATTACTCCCTTCAAAATAAT
TGATGTTTGACATAATCAATGTGATGTTTAATTTTTTTTTCTTTCAAATTTGCCCTTCCTAACCCCTATAATGATTATGT
CAAATCCAAAGTGAAAAGACTATCATAATTACATATGCTTTAGTCACAATTAATTCATGTTAAATCATCAATAGTTTTGG
ATTGGAGGGAGTACTCATTAGGAAAAATAATTAAGCTAAATCATTCTTATTTTCACTGTACATTATTTAGATTAAGGGTG
AAATAGGGGAGGAATCAATTATCTTATTTTTCTAAATGGACAAGTATTTTGAAATAACAAATTTTAAGAAAACACGTCAA
GTCAAATAGAGTAGGATGGATGGAGTAAATTCTAACCTTTCTAGATATTCATAAAAATTAGTTGAACAGACATTTTAATA
AAGACCACAAGTTGATGAATTAAGCTTGTTGTTCCAATATAATTGGGATTAACATGAGATCTTGTGGCAGTAATGTTTTT
TGCTTTTGTGCAATTTTCCAATAAAAAGAAAACACTTGATTGGGTCAGTATTATACAAGTTTGGAAACCAATCACGTTAT
GTGGGTCATACTTTTTTGTAGTAATGTAATAATACCAATAGTGGGGCCCCCACTCAAAGTAATCCATCTTCCACTTGATT
TTTTTATTTTTTTTTGAAATGGAGTAGGTTATCTTGGCCGCTTAGCAATTACTATTATCATGAGTAAATGACGGAAATTA
TAAATTTTTAAGATAAAATTATTATTAATCTTTTATAATTTTATGGTTATAAAAGTCTCTCAAACTAATACAATAATATA
AGCGCTGATACATGAGTCTGATGTGCGAGATACATTAATCTGATAGGTAAAAATGAGGAACTAGAAATTTATAAAACTAA
TATGAATAATGATAATAAGATAACTTAAATGTGAAATTTCTATCATTTCTCCTAACATACCACTAGTGAAATTTGTTTAC
GTATCTTGTTGAAGAAAATCTTATCCAAAAGTCAAAAATAAAAACTCGTGGCCAAATTTTCAAAAAAAAAGAAGGTTATC
TTTTTGCCGCAAAAAGCATAGCAATTTTGGTACGGAACGTATTGAGATTTTGTAGAGTATTTTATAATTCAAATTGCATA
GAAAAGTCTTACCTATACAAGTAAAAACTTTGAAATTTCTATTAACGTGAATAAATTGGTTAACAGGACCATTGTATCAC
AAGGGATGGTACCACCTTTTTTATCAATACAATCCAGATTCAGCTATTTGGGGAAATATCACATGGGGCCATGCTGTATC
CAAGGACTTGATCCACTGGCTCTACTTGCCTTTTGCCATGGTTCCTGATCAATGGTATGATATTAACGGTGTCTGGACAG
GGTCCGCTACCATCCTACCCGATGGTCAGATCATGATGCTTTATACCGGTGACACTGATGATTATGTGCAAGTGCAAAAT
CTTGCGTACCCCGCCAACTTATCTGATCCTCTCCTTCTAGACTGGGTCAAGTTCAAAGGCAACCCGGTTCTGGTTCCTCC
ACCCGGCATTGGTGTCAAGGACTTTAGAGACCCGACTACTGCTTGGACCGGACCACAAAATGGGCAATGGCTGTTAACAA
TCGGGTCTAAGATTGGTAAAACGGGTGTTGCACTTGTTTATGAAACTTCCAACTTCACAAGCTTTAAGCTATTGGATGGA
GTGCTGCATGCGGTTCCGGGTACGGGTATGTGGGAGTGTGTGGACTTTTACCCGGTATCTACTAAAAAAACAAACGGGTT
GGACACATCATATAACGGGCCGGGTGTAAAGCATGTGTTAAAAGCAAGTTTAGATGACAATAAGCAAGATCATTATGCTA
TTGGTACGTATGACTTGGGAAAGAACAAATGGACACCCGATAACCCGGAATTGGATTGTGGAATTGGGTTGAGACTAGAC
TATGGGAAATATTATGCATCAAAGACTTTTTATGACCCGAAGAAAGAACGAAGAGTACTGTGGGGATGGATTGGGGAAAC
TGACAGTGAATCTGCTGACCTGCAGAAGGGATGGGCATCTGTACAGGTATGGACTTGGATGAACACATTGTTTTGTTATT
TTACTTTGCACCATACACAGCGTCTAGTTGTATCGTAATAATCATGGTAGGGAAATTTCTTATTTAGAGAAAGTTGTTAT
AATCAATGCATTTGTAGGTGAAGTAAATTCTGAATTGTATATGAAACGTGTCTAATAGTGTTTCGAAATAACAGAGTATT
CCAAGGACAGTGCTTTACGACAAGAAGACAGGGACACATCTACTTCAGTGGCCAGTGGAAGAAATTGAAAGCTTAAGAGT
GGGTGATCCTACTGTTAAGCAAGTCGATCTTCAACCAGGCTCAATTGAGCTACTCCGTGTTGACTCAGCTGCAGAGGTTT
GTTGCGTTACTTTTGTTTTAAATTACAAACACGCGCTTAATCTGCAGTCCCAAAACTTGTTTAGCTATTGTGCAGTTGGA
TATAGAAGCCTCATTTGAAGTGGACAAAGTCGCGCTTCAGGGAATAATTGAAGCAGATCATGTAGGTTTCAGTTGCTCTA
CTAGTGGAGGTGCTGCTAGCAGAGGCATTTTGGGACCATTTGGTGTCATAGTAATTGCTGATCAAACGCTATCTGAGCTA
ACGCCAGTTTACTTTTACATTTCTAAAGGAGCTGATGGTCGTGCAGAGACTCACTTCTGTGCTGATCAAACTAGGTTTGC
TTTTCTATCTGGCACAATTAATTTGTCCTTGTAAAATGGAGATGGATAAAAGTAGCGGGTTGTTGATCTGATATATGCAG
ATCCTCTGAGGCTCCGGGAGTTGGTAAACAAGTTTATGGTAGTTCAGTACCTGTGTTGGACGGTGAAAAACATTCAATGA
GATTATTGGTAAGTGATAATGATTCCCTTATTTTACCTTGATTTTATTCCATTTCTTCACTTCACAATAATTAAAGTACT
TGGCAGTTGCATTTGAGTAAAAGGTTTTTTATAAACTGAATTTTAGGTGGATCACTCAATTGTGGAGAGCTTTGCTCAAG
GAGGAAGAACAGTCATAACATCGCGAATTTACCCAACAAAGGCAGTAAATGGAGCAGCACGACTCTTTGTTTTCAACAAT
GCCACAGGGGCTAGCGTTACTGCCTCCGTCAAGATTTGGTCACTTGAGTCAGCTAATATTCAATCCTTCCCTTTGCAAGA
CTTGTAATCTTCTTTATTTCGTTTTTTTTCTTTTTCATTTGAAGGTTATTTCACCGACGTCCCATCAAGAAAGGGAAGAG
GGAGATCAATATATGTAGTGTTATTCGCCCTACCTTAGGATTAGATGTCATCTAGCAATGTCAAATCTAGTAGAGTATAC
AATGTATGGGTTCCTGGAAACCGAGTAGAGCTTACCTGGATTCTATGTAAACTAAGAAAGCTCAGCAAATATATGCACAA
ATAATTTACAGAAACAACTTGGGAATGTTGACAAACT
TTGGTCCCAGTCATTTTCTGTGTTCATCACCTATATATATAGCAGTAGACTAGTAGCTTCTCCCATTCCTCTATCTTCTA
TTATGGCCACTCAGTGTTATGACCCCGAAAACTCCGCCTCTCGTTACACATTACTCCCGGATCAACCCGATTCCGGCCAC
CGGAAGTCCCTTAAAATCATCTCCGGCATTTTCCTCTCCGTTTTCCTTTTGCTTTCTGTAGCCTTCTTTCCGATCCTCAA
CAACCAGTCACCGGACTTGCAAATCGACTCCCGTTCGCCGGCGCCGCCGTCAAGAGGTGTTTCTCAGGGAGTCTCCGATA
AAACTTTTCGAGATGTAGCCGGTGCTAGTCACGTTTCTTATGCGTGGTCCAATGCTATGCTTAGCTGGCAAAGAACGGCT
TACCATTTTCAACCTCAAAAAAATTGGATGAACGGTAATTAACTTTCTTATTTTGACTTTTCTTTAATTTCTTTTTTATT
TGATCTTAAAATTGAAATTATTTATAAATACTTATAACAGTTCTTTTTTTTCTCAATGATATTTATGGCTATTGATCTGT
TGGGGGTATCTTTTGGATTCTGATTGGATGCTATTCTGCAGATCCTAATGGTGAGTTCAAAGTTAATTATTATCACTATT
TTCTGCTAGTTTTTAATTAATTATATTCTTAAACTATGATTATAACTTTTAAAGCAATCTCATGAATGAGCAAATCATTA
ATTCGGGTGCTTATGTATATCATCTCGGTTAATCCTTTTACCTTATACTCAAAAACAAATATTACTCCCTTCAAAATAAT
TGATGTTTGACATAATCAATGTGATGTTTAATTTTTTTTTCTTTCAAATTTGCCCTTCCTAACCCCTATAATGATTATGT
CAAATCCAAAGTGAAAAGACTATCATAATTACATATGCTTTAGTCACAATTAATTCATGTTAAATCATCAATAGTTTTGG
ATTGGAGGGAGTACTCATTAGGAAAAATAATTAAGCTAAATCATTCTTATTTTCACTGTACATTATTTAGATTAAGGGTG
AAATAGGGGAGGAATCAATTATCTTATTTTTCTAAATGGACAAGTATTTTGAAATAACAAATTTTAAGAAAACACGTCAA
GTCAAATAGAGTAGGATGGATGGAGTAAATTCTAACCTTTCTAGATATTCATAAAAATTAGTTGAACAGACATTTTAATA
AAGACCACAAGTTGATGAATTAAGCTTGTTGTTCCAATATAATTGGGATTAACATGAGATCTTGTGGCAGTAATGTTTTT
TGCTTTTGTGCAATTTTCCAATAAAAAGAAAACACTTGATTGGGTCAGTATTATACAAGTTTGGAAACCAATCACGTTAT
GTGGGTCATACTTTTTTGTAGTAATGTAATAATACCAATAGTGGGGCCCCCACTCAAAGTAATCCATCTTCCACTTGATT
TTTTTATTTTTTTTTGAAATGGAGTAGGTTATCTTGGCCGCTTAGCAATTACTATTATCATGAGTAAATGACGGAAATTA
TAAATTTTTAAGATAAAATTATTATTAATCTTTTATAATTTTATGGTTATAAAAGTCTCTCAAACTAATACAATAATATA
AGCGCTGATACATGAGTCTGATGTGCGAGATACATTAATCTGATAGGTAAAAATGAGGAACTAGAAATTTATAAAACTAA
TATGAATAATGATAATAAGATAACTTAAATGTGAAATTTCTATCATTTCTCCTAACATACCACTAGTGAAATTTGTTTAC
GTATCTTGTTGAAGAAAATCTTATCCAAAAGTCAAAAATAAAAACTCGTGGCCAAATTTTCAAAAAAAAAGAAGGTTATC
TTTTTGCCGCAAAAAGCATAGCAATTTTGGTACGGAACGTATTGAGATTTTGTAGAGTATTTTATAATTCAAATTGCATA
GAAAAGTCTTACCTATACAAGTAAAAACTTTGAAATTTCTATTAACGTGAATAAATTGGTTAACAGGACCATTGTATCAC
AAGGGATGGTACCACCTTTTTTATCAATACAATCCAGATTCAGCTATTTGGGGAAATATCACATGGGGCCATGCTGTATC
CAAGGACTTGATCCACTGGCTCTACTTGCCTTTTGCCATGGTTCCTGATCAATGGTATGATATTAACGGTGTCTGGACAG
GGTCCGCTACCATCCTACCCGATGGTCAGATCATGATGCTTTATACCGGTGACACTGATGATTATGTGCAAGTGCAAAAT
CTTGCGTACCCCGCCAACTTATCTGATCCTCTCCTTCTAGACTGGGTCAAGTTCAAAGGCAACCCGGTTCTGGTTCCTCC
ACCCGGCATTGGTGTCAAGGACTTTAGAGACCCGACTACTGCTTGGACCGGACCACAAAATGGGCAATGGCTGTTAACAA
TCGGGTCTAAGATTGGTAAAACGGGTGTTGCACTTGTTTATGAAACTTCCAACTTCACAAGCTTTAAGCTATTGGATGGA
GTGCTGCATGCGGTTCCGGGTACGGGTATGTGGGAGTGTGTGGACTTTTACCCGGTATCTACTAAAAAAACAAACGGGTT
GGACACATCATATAACGGGCCGGGTGTAAAGCATGTGTTAAAAGCAAGTTTAGATGACAATAAGCAAGATCATTATGCTA
TTGGTACGTATGACTTGGGAAAGAACAAATGGACACCCGATAACCCGGAATTGGATTGTGGAATTGGGTTGAGACTAGAC
TATGGGAAATATTATGCATCAAAGACTTTTTATGACCCGAAGAAAGAACGAAGAGTACTGTGGGGATGGATTGGGGAAAC
TGACAGTGAATCTGCTGACCTGCAGAAGGGATGGGCATCTGTACAGGTATGGACTTGGATGAACACATTGTTTTGTTATT
TTACTTTGCACCATACACAGCGTCTAGTTGTATCGTAATAATCATGGTAGGGAAATTTCTTATTTAGAGAAAGTTGTTAT
AATCAATGCATTTGTAGGTGAAGTAAATTCTGAATTGTATATGAAACGTGTCTAATAGTGTTTCGAAATAACAGAGTATT
CCAAGGACAGTGCTTTACGACAAGAAGACAGGGACACATCTACTTCAGTGGCCAGTGGAAGAAATTGAAAGCTTAAGAGT
GGGTGATCCTACTGTTAAGCAAGTCGATCTTCAACCAGGCTCAATTGAGCTACTCCGTGTTGACTCAGCTGCAGAGGTTT
GTTGCGTTACTTTTGTTTTAAATTACAAACACGCGCTTAATCTGCAGTCCCAAAACTTGTTTAGCTATTGTGCAGTTGGA
TATAGAAGCCTCATTTGAAGTGGACAAAGTCGCGCTTCAGGGAATAATTGAAGCAGATCATGTAGGTTTCAGTTGCTCTA
CTAGTGGAGGTGCTGCTAGCAGAGGCATTTTGGGACCATTTGGTGTCATAGTAATTGCTGATCAAACGCTATCTGAGCTA
ACGCCAGTTTACTTTTACATTTCTAAAGGAGCTGATGGTCGTGCAGAGACTCACTTCTGTGCTGATCAAACTAGGTTTGC
TTTTCTATCTGGCACAATTAATTTGTCCTTGTAAAATGGAGATGGATAAAAGTAGCGGGTTGTTGATCTGATATATGCAG
ATCCTCTGAGGCTCCGGGAGTTGGTAAACAAGTTTATGGTAGTTCAGTACCTGTGTTGGACGGTGAAAAACATTCAATGA
GATTATTGGTAAGTGATAATGATTCCCTTATTTTACCTTGATTTTATTCCATTTCTTCACTTCACAATAATTAAAGTACT
TGGCAGTTGCATTTGAGTAAAAGGTTTTTTATAAACTGAATTTTAGGTGGATCACTCAATTGTGGAGAGCTTTGCTCAAG
GAGGAAGAACAGTCATAACATCGCGAATTTACCCAACAAAGGCAGTAAATGGAGCAGCACGACTCTTTGTTTTCAACAAT
GCCACAGGGGCTAGCGTTACTGCCTCCGTCAAGATTTGGTCACTTGAGTCAGCTAATATTCAATCCTTCCCTTTGCAAGA
CTTGTAATCTTCTTTATTTCGTTTTTTTTCTTTTTCATTTGAAGGTTATTTCACCGACGTCCCATCAAGAAAGGGAAGAG
GGAGATCAATATATGTAGTGTTATTCGCCCTACCTTAGGATTAGATGTCATCTAGCAATGTCAAATCTAGTAGAGTATAC
AATGTATGGGTTCCTGGAAACCGAGTAGAGCTTACCTGGATTCTATGTAAACTAAGAAAGCTCAGCAAATATATGCACAA
ATAATTTACAGAAACAACTTGGGAATGTTGACAAACT
Download sequence region |
Get flanking sequences on SL2.50ch03
|
![]() ![]() |
![]() ![]() | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>Solyc03g083910.2.1 Acid beta-fructofuranosidase (AHRD V1 **-- Q575T1_WHEAT); contains Interpro domain(s) IPR001362 Glycoside hydrolase, family 32
TTGGTCCCAGTCATTTTCTGTGTTCATCACCTATATATATAGCAGTAGACTAGTAGCTTCTCCCATTCCTCTATCTTCTA
TTATGGCCACTCAGTGTTATGACCCCGAAAACTCCGCCTCTCGTTACACATTACTCCCGGATCAACCCGATTCCGGCCAC
CGGAAGTCCCTTAAAATCATCTCCGGCATTTTCCTCTCCGTTTTCCTTTTGCTTTCTGTAGCCTTCTTTCCGATCCTCAA
CAACCAGTCACCGGACTTGCAAATCGACTCCCGTTCGCCGGCGCCGCCGTCAAGAGGTGTTTCTCAGGGAGTCTCCGATA
AAACTTTTCGAGATGTAGCCGGTGCTAGTCACGTTTCTTATGCGTGGTCCAATGCTATGCTTAGCTGGCAAAGAACGGCT
TACCATTTTCAACCTCAAAAAAATTGGATGAACGATCCTAATGGACCATTGTATCACAAGGGATGGTACCACCTTTTTTA
TCAATACAATCCAGATTCAGCTATTTGGGGAAATATCACATGGGGCCATGCTGTATCCAAGGACTTGATCCACTGGCTCT
ACTTGCCTTTTGCCATGGTTCCTGATCAATGGTATGATATTAACGGTGTCTGGACAGGGTCCGCTACCATCCTACCCGAT
GGTCAGATCATGATGCTTTATACCGGTGACACTGATGATTATGTGCAAGTGCAAAATCTTGCGTACCCCGCCAACTTATC
TGATCCTCTCCTTCTAGACTGGGTCAAGTTCAAAGGCAACCCGGTTCTGGTTCCTCCACCCGGCATTGGTGTCAAGGACT
TTAGAGACCCGACTACTGCTTGGACCGGACCACAAAATGGGCAATGGCTGTTAACAATCGGGTCTAAGATTGGTAAAACG
GGTGTTGCACTTGTTTATGAAACTTCCAACTTCACAAGCTTTAAGCTATTGGATGGAGTGCTGCATGCGGTTCCGGGTAC
GGGTATGTGGGAGTGTGTGGACTTTTACCCGGTATCTACTAAAAAAACAAACGGGTTGGACACATCATATAACGGGCCGG
GTGTAAAGCATGTGTTAAAAGCAAGTTTAGATGACAATAAGCAAGATCATTATGCTATTGGTACGTATGACTTGGGAAAG
AACAAATGGACACCCGATAACCCGGAATTGGATTGTGGAATTGGGTTGAGACTAGACTATGGGAAATATTATGCATCAAA
GACTTTTTATGACCCGAAGAAAGAACGAAGAGTACTGTGGGGATGGATTGGGGAAACTGACAGTGAATCTGCTGACCTGC
AGAAGGGATGGGCATCTGTACAGAGTATTCCAAGGACAGTGCTTTACGACAAGAAGACAGGGACACATCTACTTCAGTGG
CCAGTGGAAGAAATTGAAAGCTTAAGAGTGGGTGATCCTACTGTTAAGCAAGTCGATCTTCAACCAGGCTCAATTGAGCT
ACTCCGTGTTGACTCAGCTGCAGAGTTGGATATAGAAGCCTCATTTGAAGTGGACAAAGTCGCGCTTCAGGGAATAATTG
AAGCAGATCATGTAGGTTTCAGTTGCTCTACTAGTGGAGGTGCTGCTAGCAGAGGCATTTTGGGACCATTTGGTGTCATA
GTAATTGCTGATCAAACGCTATCTGAGCTAACGCCAGTTTACTTTTACATTTCTAAAGGAGCTGATGGTCGTGCAGAGAC
TCACTTCTGTGCTGATCAAACTAGGTTTGCTTTTCTATCTGGCACAATTAATTTGTCCTTATCCTCTGAGGCTCCGGGAG
TTGGTAAACAAGTTTATGGTAGTTCAGTACCTGTGTTGGACGGTGAAAAACATTCAATGAGATTATTGGTGGATCACTCA
ATTGTGGAGAGCTTTGCTCAAGGAGGAAGAACAGTCATAACATCGCGAATTTACCCAACAAAGGCAGTAAATGGAGCAGC
ACGACTCTTTGTTTTCAACAATGCCACAGGGGCTAGCGTTACTGCCTCCGTCAAGATTTGGTCACTTGAGTCAGCTAATA
TTCAATCCTTCCCTTTGCAAGACTTGTAATCTTCTTTATTTCGTTTTTTTTCTTTTTCATTTGAAGGTTATTTCACCGAC
GTCCCATCAAGAAAGGGAAGAGGGAGATCAATATATGTAGTGTTATTCGCCCTACCTTAGGATTAGATGTCATCTAGCAA
TGTCAAATCTAGTAGAGTATACAATGTATGGGTTCCTGGAAACCGAGTAGAGCTTACCTGGATTCTATGTAAACTAAGAA
AGCTCAGCAAATATATGCACAAATAATTTACAGAAACAACTTGGGAATGTTGACAAACT
TTGGTCCCAGTCATTTTCTGTGTTCATCACCTATATATATAGCAGTAGACTAGTAGCTTCTCCCATTCCTCTATCTTCTA
TTATGGCCACTCAGTGTTATGACCCCGAAAACTCCGCCTCTCGTTACACATTACTCCCGGATCAACCCGATTCCGGCCAC
CGGAAGTCCCTTAAAATCATCTCCGGCATTTTCCTCTCCGTTTTCCTTTTGCTTTCTGTAGCCTTCTTTCCGATCCTCAA
CAACCAGTCACCGGACTTGCAAATCGACTCCCGTTCGCCGGCGCCGCCGTCAAGAGGTGTTTCTCAGGGAGTCTCCGATA
AAACTTTTCGAGATGTAGCCGGTGCTAGTCACGTTTCTTATGCGTGGTCCAATGCTATGCTTAGCTGGCAAAGAACGGCT
TACCATTTTCAACCTCAAAAAAATTGGATGAACGATCCTAATGGACCATTGTATCACAAGGGATGGTACCACCTTTTTTA
TCAATACAATCCAGATTCAGCTATTTGGGGAAATATCACATGGGGCCATGCTGTATCCAAGGACTTGATCCACTGGCTCT
ACTTGCCTTTTGCCATGGTTCCTGATCAATGGTATGATATTAACGGTGTCTGGACAGGGTCCGCTACCATCCTACCCGAT
GGTCAGATCATGATGCTTTATACCGGTGACACTGATGATTATGTGCAAGTGCAAAATCTTGCGTACCCCGCCAACTTATC
TGATCCTCTCCTTCTAGACTGGGTCAAGTTCAAAGGCAACCCGGTTCTGGTTCCTCCACCCGGCATTGGTGTCAAGGACT
TTAGAGACCCGACTACTGCTTGGACCGGACCACAAAATGGGCAATGGCTGTTAACAATCGGGTCTAAGATTGGTAAAACG
GGTGTTGCACTTGTTTATGAAACTTCCAACTTCACAAGCTTTAAGCTATTGGATGGAGTGCTGCATGCGGTTCCGGGTAC
GGGTATGTGGGAGTGTGTGGACTTTTACCCGGTATCTACTAAAAAAACAAACGGGTTGGACACATCATATAACGGGCCGG
GTGTAAAGCATGTGTTAAAAGCAAGTTTAGATGACAATAAGCAAGATCATTATGCTATTGGTACGTATGACTTGGGAAAG
AACAAATGGACACCCGATAACCCGGAATTGGATTGTGGAATTGGGTTGAGACTAGACTATGGGAAATATTATGCATCAAA
GACTTTTTATGACCCGAAGAAAGAACGAAGAGTACTGTGGGGATGGATTGGGGAAACTGACAGTGAATCTGCTGACCTGC
AGAAGGGATGGGCATCTGTACAGAGTATTCCAAGGACAGTGCTTTACGACAAGAAGACAGGGACACATCTACTTCAGTGG
CCAGTGGAAGAAATTGAAAGCTTAAGAGTGGGTGATCCTACTGTTAAGCAAGTCGATCTTCAACCAGGCTCAATTGAGCT
ACTCCGTGTTGACTCAGCTGCAGAGTTGGATATAGAAGCCTCATTTGAAGTGGACAAAGTCGCGCTTCAGGGAATAATTG
AAGCAGATCATGTAGGTTTCAGTTGCTCTACTAGTGGAGGTGCTGCTAGCAGAGGCATTTTGGGACCATTTGGTGTCATA
GTAATTGCTGATCAAACGCTATCTGAGCTAACGCCAGTTTACTTTTACATTTCTAAAGGAGCTGATGGTCGTGCAGAGAC
TCACTTCTGTGCTGATCAAACTAGGTTTGCTTTTCTATCTGGCACAATTAATTTGTCCTTATCCTCTGAGGCTCCGGGAG
TTGGTAAACAAGTTTATGGTAGTTCAGTACCTGTGTTGGACGGTGAAAAACATTCAATGAGATTATTGGTGGATCACTCA
ATTGTGGAGAGCTTTGCTCAAGGAGGAAGAACAGTCATAACATCGCGAATTTACCCAACAAAGGCAGTAAATGGAGCAGC
ACGACTCTTTGTTTTCAACAATGCCACAGGGGCTAGCGTTACTGCCTCCGTCAAGATTTGGTCACTTGAGTCAGCTAATA
TTCAATCCTTCCCTTTGCAAGACTTGTAATCTTCTTTATTTCGTTTTTTTTCTTTTTCATTTGAAGGTTATTTCACCGAC
GTCCCATCAAGAAAGGGAAGAGGGAGATCAATATATGTAGTGTTATTCGCCCTACCTTAGGATTAGATGTCATCTAGCAA
TGTCAAATCTAGTAGAGTATACAATGTATGGGTTCCTGGAAACCGAGTAGAGCTTACCTGGATTCTATGTAAACTAAGAA
AGCTCAGCAAATATATGCACAAATAATTTACAGAAACAACTTGGGAATGTTGACAAACT
![]() ![]() | translated polypeptide sequence |
>Solyc03g083910.2.1 Acid beta-fructofuranosidase (AHRD V1 **-- Q575T1_WHEAT); contains Interpro domain(s) IPR001362 Glycoside hydrolase, family 32
MATQCYDPENSASRYTLLPDQPDSGHRKSLKIISGIFLSVFLLLSVAFFPILNNQSPDLQIDSRSPAPPSRGVSQGVSDK
TFRDVAGASHVSYAWSNAMLSWQRTAYHFQPQKNWMNDPNGPLYHKGWYHLFYQYNPDSAIWGNITWGHAVSKDLIHWLY
LPFAMVPDQWYDINGVWTGSATILPDGQIMMLYTGDTDDYVQVQNLAYPANLSDPLLLDWVKFKGNPVLVPPPGIGVKDF
RDPTTAWTGPQNGQWLLTIGSKIGKTGVALVYETSNFTSFKLLDGVLHAVPGTGMWECVDFYPVSTKKTNGLDTSYNGPG
VKHVLKASLDDNKQDHYAIGTYDLGKNKWTPDNPELDCGIGLRLDYGKYYASKTFYDPKKERRVLWGWIGETDSESADLQ
KGWASVQSIPRTVLYDKKTGTHLLQWPVEEIESLRVGDPTVKQVDLQPGSIELLRVDSAAELDIEASFEVDKVALQGIIE
ADHVGFSCSTSGGAASRGILGPFGVIVIADQTLSELTPVYFYISKGADGRAETHFCADQTRFAFLSGTINLSLSSEAPGV
GKQVYGSSVPVLDGEKHSMRLLVDHSIVESFAQGGRTVITSRIYPTKAVNGAARLFVFNNATGASVTASVKIWSLESANI
QSFPLQDL*
MATQCYDPENSASRYTLLPDQPDSGHRKSLKIISGIFLSVFLLLSVAFFPILNNQSPDLQIDSRSPAPPSRGVSQGVSDK
TFRDVAGASHVSYAWSNAMLSWQRTAYHFQPQKNWMNDPNGPLYHKGWYHLFYQYNPDSAIWGNITWGHAVSKDLIHWLY
LPFAMVPDQWYDINGVWTGSATILPDGQIMMLYTGDTDDYVQVQNLAYPANLSDPLLLDWVKFKGNPVLVPPPGIGVKDF
RDPTTAWTGPQNGQWLLTIGSKIGKTGVALVYETSNFTSFKLLDGVLHAVPGTGMWECVDFYPVSTKKTNGLDTSYNGPG
VKHVLKASLDDNKQDHYAIGTYDLGKNKWTPDNPELDCGIGLRLDYGKYYASKTFYDPKKERRVLWGWIGETDSESADLQ
KGWASVQSIPRTVLYDKKTGTHLLQWPVEEIESLRVGDPTVKQVDLQPGSIELLRVDSAAELDIEASFEVDKVALQGIIE
ADHVGFSCSTSGGAASRGILGPFGVIVIADQTLSELTPVYFYISKGADGRAETHFCADQTRFAFLSGTINLSLSSEAPGV
GKQVYGSSVPVLDGEKHSMRLLVDHSIVESFAQGGRTVITSRIYPTKAVNGAARLFVFNNATGASVTASVKIWSLESANI
QSFPLQDL*
![]() ![]() |
![]() ![]() | [Associate new unigene] |
Unigene ID:
SGN-U577441 Tomato 200607 -- build 2 -- 3 members [Remove] [Blast]
SGN-U578061 Tomato 200607 -- build 2 -- 5 members [Remove] [Blast]
SGN-U578181 Tomato 200607 -- build 2 -- 3 members [Remove] [Blast]
SGN-U578195 Tomato 200607 -- build 2 -- 342 members [Remove] [Blast]
SGN-U578305 Tomato 200607 -- build 2 -- 440 members [Remove] [Blast]
SGN-U580029 Tomato 200607 -- build 2 -- 22 members [Remove] [Blast]
SGN-U580076 Tomato 200607 -- build 2 -- 14 members [Remove] [Blast]
SGN-U580710 Tomato 200607 -- build 2 -- 3 members [Remove] [Blast]
SGN-U590341 Tomato 200607 -- build 2 -- 1 members [Remove] [Blast]
SGN-U593230 Tomato 200607 -- build 2 -- 1 members [Remove] [Blast]
SGN-U593692 Tomato 200607 -- build 2 -- 1 members [Remove] [Blast]
SGN-U578061 Tomato 200607 -- build 2 -- 5 members [Remove] [Blast]
SGN-U578181 Tomato 200607 -- build 2 -- 3 members [Remove] [Blast]
SGN-U578195 Tomato 200607 -- build 2 -- 342 members [Remove] [Blast]
SGN-U578305 Tomato 200607 -- build 2 -- 440 members [Remove] [Blast]
SGN-U580029 Tomato 200607 -- build 2 -- 22 members [Remove] [Blast]
SGN-U580076 Tomato 200607 -- build 2 -- 14 members [Remove] [Blast]
SGN-U580710 Tomato 200607 -- build 2 -- 3 members [Remove] [Blast]
SGN-U590341 Tomato 200607 -- build 2 -- 1 members [Remove] [Blast]
SGN-U593230 Tomato 200607 -- build 2 -- 1 members [Remove] [Blast]
SGN-U593692 Tomato 200607 -- build 2 -- 1 members [Remove] [Blast]
![]() ![]() | [Associate new genbank sequence] |
M81081 Tomato acid invertase (TIV1) mRNA, complete cds.
AF465612 Lycopersicon esculentum clone 1 minor allergen beta-fructofuranosidase precursor, mRNA, complete cds.
AF465613 Lycopersicon esculentum clone 2 minor allergen beta-fructofuranosidase precursor, mRNA, complete cds.
AF490530 Lycopersicon esculentum beta-fructofuranosidase TAI 20-19 mRNA, partial cds.
Z12025 L.esculentum beta-fructosidase mRNA for vacuolar invertase.
D11350 Solanum lycopersicum Aiv-1 mRNA for beta-fructosidase, complete cds.
X77264 L.esculentum mRNA for acid invertase.
S70040 acid invertase [Lycopersicon esculentum=tomatoes, cv. Super First, fruits, mRNA, 2372 nt].
AF465612 Lycopersicon esculentum clone 1 minor allergen beta-fructofuranosidase precursor, mRNA, complete cds.
AF465613 Lycopersicon esculentum clone 2 minor allergen beta-fructofuranosidase precursor, mRNA, complete cds.
AF490530 Lycopersicon esculentum beta-fructofuranosidase TAI 20-19 mRNA, partial cds.
Z12025 L.esculentum beta-fructosidase mRNA for vacuolar invertase.
D11350 Solanum lycopersicum Aiv-1 mRNA for beta-fructosidase, complete cds.
X77264 L.esculentum mRNA for acid invertase.
S70040 acid invertase [Lycopersicon esculentum=tomatoes, cv. Super First, fruits, mRNA, 2372 nt].
Other genome matches | None |
![]() ![]() | [Associate publication] [Matching publications] |
A novel cDNA clone for acid invertase in tomato fruit.
Idengaku zasshi (1992)
Show / hide abstract
Show / hide abstract
The sequence of a novel cDNA clone, Aiv-1, for tomato acid invertase was similar to that of TIV1 (Klann et al., 1992) for the enzyme except for a unique intron-like insertion. It is considered that Aiv-1 is derived from either an alternatively spliced mRNA for an isozyme or a pre-mRNA of TIV1.
Ohyama, A. Hirai, M. Nishimura, S.
Idengaku zasshi.
1992.
67(6).
491-2.
Intercellular localization of acid invertase in tomato fruit and molecular cloning of a cDNA for the enzyme.
Plant & cell physiology (1993)
Show / hide abstract
Show / hide abstract
The localization of acid invertase (AI, EC 3.2.1.26) in tomato fruits was studied. AI was localized in the intercellular fraction (cell wall fraction). A cDNA encoding a wall-bound form of AI from tomato fruits was cloned and its nucleotide sequence was determined. The cloned cDNA was 2363 base pairs long and contained an open reading frame of 1908 base pairs which encoded a polypeptide of 636 amino acids. RNA blot analysis indicated that the mRNA for the acid invertase was about 2.5 kb in length. The levels of the mRNA were low at the mature green stage but increased during ripening of fruit.
Sato, T. Iwatsubo, T. Takahashi, M. Nakagawa, H. Ogura, N. Mori, H.
Plant & cell physiology.
1993.
34(2).
263-9.
Isolation and characterization of fruit vacuolar invertase genes from two tomato species and temporal differences in mRNA levels during fruit ripening.
Plant molecular biology (1993)
Show / hide abstract
Show / hide abstract
To determine the relationship between invertase gene expression and glucose and fructose accumulation in ripening tomato fruit, fruit vacuolar invertase cDNA and genomic clones from the cultivated species, Lycopersicon esculentum cv. UC82B, and a wild species, Lycopersicon pimpinellifolium, were isolated and characterized. The coding sequences of all cDNA clones examined are identical. By comparison to the known amino acid sequence of mature L. esculentum fruit vacuolar invertase, a putative signal sequence and putative amino-terminal and carboxy-terminal propeptides were identified in the derived amino acid sequence. Of the residues 42% are identical with those of carrot cell wall invertase. A putative catalytic site and a five-residue motif found in carrot, yeast, and bacterial invertases are also present in the tomato sequence. Minor differences between the nucleotide sequences of the genomic clones from the two tomato species were found in one intron and in the putative regulatory region. The gene appears to be present in one copy per haploid genome. Northern analysis suggests a different temporal pattern of vacuolar invertase mRNA levels during fruit development in the two species, with the invertase mRNA appearing at an earlier stage of fruit development in the wild species. Nucleotide differences found in the putative regulatory regions may be involved in species differences in temporal regulation of this gene, which in turn may contribute to observed differences in hexose accumulation in ripening fruit.
Elliott, KJ. Butler, WO. Dickinson, CD. Konno, Y. Vedvick, TS. Fitzmaurice, L. Mirkov, TE.
Plant molecular biology.
1993.
21(3).
515-24.
![]() ![]() | [Add ontology annotations] |
biological_process
|
cellular_component |
molecular_function
|
plant_anatomy
|
![]() ![]() |
- Genomic details
Please wait, checking for comments about locus 1418
Your Lists
Public Lists
List Contents
List Validation Report: Failed
Elements not found:
Optional: Add Missing Accessions to A List
Mismatched case
Click the Adjust Case button to align the case in the list with what is in the database.
Multiple mismatched case
Items listed here have mulitple case mismatches and must be fixed manually. If accessions need to be merged, contact the database directly.
List elements matching a synonym
Multiple synonym matches
Fuzzy Search Results
Synonym Search Results
Available Seedlots
Your Datasets
Public Datasets
Dataset Contents
Dataset Validation Failed
Elements not found:
Your Calendar
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Having trouble viewing events on the calendar?
Are you associated with the breeding program you are interested in viewing?
Add New Event
Event Info
Attribute | Value |
---|---|
Project Name: | |
Start Date: | |
End Date: | |
Event Type: | |
Event Description: | |
Event Web URL: |
Edit Event
Login
Forgot Username
If you've forgotten your username, enter your email address below. An email will be sent with any account username(s) associated with your email address.
Reset Password
To reset your password, please enter your email address. A link will be sent to that address with a link that will enable you to reset your password.
Create New User
Working
