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Potato locus cinnamoyl CoA reductase 2
Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
New Edit Delete
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Locus | PGSC0003DMG400010000 |
Locus name | cinnamoyl CoA reductase 2 |
Symbol | AY149609 |
Gene activity | cinnamoyl CoA reductase |
Description | |
Chromosome | 4 |
Arm |
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Registry name: | None | [Associate registry name] |
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Image | Description | Type |
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![]() ![]() | [Associate accession] |
Accession name:
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Alleles (0) | None | [Add new Allele] |
![]() ![]() | [Associate new locus] |
Associated loci - graphical view | None |
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![]() ![]() | unprocessed genomic sequence region underlying this gene |
>PGSC0003DMG400010000 PGSC_DMv3_219_ch04:64075431..64079629
CGCCAAGCACCTTCACTAGAAACACCAGCTACTAAAGATACATTCTCATAAGCTCTAGGAATAGAAATACAAGGTTGTAC
TTGAATAAGTTGAGAGCAATCTGTACCCCCAACTGAGAGCAAAATAAAACAACTAAATAGAACTCAAAAGGGGTATAGTG
TAACCTCCTTATTCCAGACTATGTATTATAGGTAATAGTTTGCAAGTGTATGAACTTGAAAGACATGCAGAGCAATTATT
TAGTACAAAGTATTACAACAAGCAAACTTCAATCCAGAAAGCCCTTTTGTTTGTAACTTTCAACTGCATCAACTAGAGTT
TCCTCCAGTGGCCTATATTGCCAACCCAACTTCTGCAACTTCTCTGAACTAAAACTTGTATCCTCCATCATATCGGTAAA
ACTGTAAAATAAAAAATACATTTAGGACAACAGGTTTAGATATACGAGCAACTTCTATGCACAAGTGTAAGAGCGCAGTC
CACTAGTGATATTGTCCGATTTGAGCCTAGGCCTACACAGATTAAAATGTTTCACTAGGGTCTAAGGGTTTTTCCAGCAT
TTCTCTGGGTAACGCATTTTAAAGTTGTGTGGTCCTAGACCCAAAGTGGACAATATCACTAGTGGGCAAGGTAACACAAG
GATATTTATGAATATACTTAATCAAATAGACCAAGTTCACTACACAGCTTTTTGTAATTTCTTAACCAGACACACTGGAA
ATAAGAAATGAAATACCCATAAGAGAAGTCCCAATTTCCTTAAGCTGCTTTTTTTTTTCCTGCAACTCTTAAACTAGACA
CAGGAAATAGGACACTAGATTCCCAATAAAGAAGCATAAAGTGGAAAGGAGAGAAATTCACCATTTAGGATAGTAGTAGT
TGGGATAGTGTTTCTTCAGCATAGCAACTAAATCTTCTGATTTCACAGTATGAGCTGCACACAAGTATCTACCTTCAGCT
TCAGGTCTCTCATACACTAGCAGTAAGGCTTCAGCTACATCACGTACGTCTACCAAAAACCGTTTCTTGTTTTCCAGCTC
TTCGTATCCTTCTGTATCAACAACACAAAGAGAAGAAATGGCATCAGTCACTTCAAGCAAAAAAAGTATACATAAAAAGC
ACAGAAACAACACATGAAACCTTTAGCATAAAAAAATGCAAAGCAACTCAGATGATACAAAAATAAGTAGATATAATTAC
TTAAGTGCTTGTGCTCCTTTTAGGTAATAAATCTCGAGGTGAATGGAGAAAGAGCAAATACCTTGTTCTCACTGAAATAG
AAAAAGTTTGTTTATTTCAGCAAATGTTCTATATTCCTAGACTCTGAACCAGTTATTTATAATATCCATGACTAATAGGT
CAACTCGTTCTACACAGAAATTAACATTTACTACCATTAAACATGAAGCTTAGTACGTAGCTCTTGGTGCACAGTAGCTA
GGAGGTCATTTATCTAACAAGGCAATACACTCGAGAATCCATAGCAAAAGCGATGCTTGAAACACTAGAGTAGAAGGATG
ACCAAAAAAACACCTGAGAAATGCTTCTAACCAGCACTATAACAAACTGGCCTACTAAGCTTTACCAAATGACCTATACA
GCACATAACTTAAATTACAATGTCTCTCTGTCATATCAAATAATTGTGCAAGTAATTTAAAATAGAGGGGCTTTAGGCAG
TTGTCCAAAGCATCTAAGGGTATAAAGTGAATGTATACATAAGGAAGAACTCACTAACTAGTGCACTGAATTTGAAATAA
TAAATTTAACCAAATGTTATGGACAAAAAGTCTTTAGCTGCCACTAACCAACATATTAAGCATGAAAAACTACAATAGAC
CTAAACTCAGTGTCTCATATGAGCCAAAAAGCTGCACACCGATTCAGGATTTCAGGTTAGTCCACCTACATGGACAAACA
ATATTCTAGAAATTTCCTCTTGCAGCTTAGCTAATATGCCTCAAAGATAACTAGACATCACTGTTTATGCTTTCAATGAT
CTCTTGCTTATAGTCAACCACCAAGTAACTTGGATAACTAAAAGTCATATATGACAAAACTTTGTTATAGTTACACATAT
ATATCAACCTAGCACTTTAAAGCATAGGTAAAGAATTTAACAAAACACAAAACTGCATGCTAAATGTATGAACAACAGTC
CGTGCTCTCAAGGAAAAACAATTAAGAAGCTTGTGGGAAAAGTGAATTCTGATTACTCCCCAATGAGCAACTCACGCAAG
CAGAAATGTAGAAGTAGAAGAAATGATGCAGAAACATTAAAACAGTGAAGTATAACTATGGTTTCTTGGTACCTTTCAGC
AGCTTAATGAGAGCCAAGCTACTTGCATTTGTTGTCTTCTGTAACATTGGCCCTACAACAAGTGCTGGGAGCACAGTTAC
CATATCAAGTCCACTTTTCTTTGCATATGACCAAGCTTCTTTCTCAGCCATTGTTTTAGAAAAACAGTACCAGTTCTGCA
TGCATTTGGAACCACAAAATGCAATCAGATAGGAAGCTGCTCTAGCAAACTAAGCATTCAAGAGTCAAATGCAAATTCTT
CTTACAATAACTAAGCCAATCAAACAGGACACAGCTCAAGTAAATTAAGTATTCAAGATACAGATCATATATTATTTTAC
CAACACTTAAGTATCATATGTAAGAAACATGACTAATAATCTTAAATGTACACAGAAGTCAAATTCGCAAACTCGCATCG
TTAAAAGAAGCTACATTAGTTGCTTTGCAGTATTCACTGTCCGACCAACAAGTCTCGTCCTTCACTTGGCCCTTCGGCCA
GTTGGGGTCCAAGGAAGCAGCAGCAACAGAAGACACAAACACAACCCTCCTGATGTTTTCTTCAGAGCATGCCTTCAGAA
CATTAAGTGTGCCGTTCACTGCAGGCTCAACAAGTTCTACCTGCAATCAAGACATTGAACATATGAAGAATTTTACTTTC
TTTTTTTCTTTGGTGCAGAACTAGAGCAATAGTTGTTTTGAAAGCAACCTAGAAATGTTGATCACTATACAATTGTCTCC
TGGATGCACCAGATTTCCCAATGTCTTAGGTTCTCCAATAGGGAAGCTCCATAGAAGTGTCTCTTATTGCAAGTATTAAT
CACCGTGAAAAGATCTTTTTGAACATTACATCATATAAAATCCCAATATAAACTCACTATCCTGTCCTTCATTTTGTAGA
AAGACACCTCTAAGTGCTTTCAACAACTAATAACATGTGCTAAGATCACTATTCTAGACTGCTCATAAAGATTCCACTAA
TGTCTGGAGATTTACAAACTGAAACCACAGGATGTGATTAATATCAACGAAGTGAAGAAGCTGATAATATCTAAACTACA
GGACATGTATGGTGTCAGGGCCAACTTGTGTGCACTTCGACTCTTCCACCGGGTACCTTCTACCTCCCACTAGCAGTCTA
GAACCCATACCAGGTAATTCTGCACCAAGGTTTAACTATATGGAGAAAATCACCAAAGTATTTTTGTAACTACTGAGATT
TGAATCCTGGTGCAAGGTTTGCATCCACTTCATTGACCACTAGACAAACCGTCACAACCTTGAATTCATTGGCTTGTGCC
GGTTTATTAGTTTACTTTGTTTTAGATATTTAGAGATCCTAGCTTTGTCAATAATTTAATAGGTGGTAGCAGATTCATAC
CTCGGGATTTGGTACAGAGCCCGAAGGAACTGGACAAGCAACATGAAATACTCCATTGCATCCTTTGATGGCTCCAGCAA
GCGAGTTGGGATCTAGCAAGTCTGCCTTGAAGAGCTTAAGGTTGTCAGCAGCTTTATCAAGGTTCTTCAAATGAGCATAC
TTGTCATCAGCTGCAAATTAAATGGAATTGAGATTGATTTCTTAGGGATCTTCAATTCCATTGAAATAAAGGTCTAAAAT
TAGTACTCCTAGTTTGAAAACAAAGAAGAAGAAGAACAAAAACAGAGTGTTTTTAGATATTAAAAAGGGAAAACTTACAA
GGATCTCTGACGGTGCCATGAACAATGTAGTCTTTAGAAAGGAGAAGCTTCACTAGCGATGAAGCCACGTATCCACCTGC
GCCAGTTACACACACTCTGGATTTCTCCGCCATCAACGCCATGCCTCTGCGATTGTAATTTCTTCTTTTGTTTTCTCGTC
TTTACTCCAAATAGCTCATCCGGAATATTCACACTAAAC
CGCCAAGCACCTTCACTAGAAACACCAGCTACTAAAGATACATTCTCATAAGCTCTAGGAATAGAAATACAAGGTTGTAC
TTGAATAAGTTGAGAGCAATCTGTACCCCCAACTGAGAGCAAAATAAAACAACTAAATAGAACTCAAAAGGGGTATAGTG
TAACCTCCTTATTCCAGACTATGTATTATAGGTAATAGTTTGCAAGTGTATGAACTTGAAAGACATGCAGAGCAATTATT
TAGTACAAAGTATTACAACAAGCAAACTTCAATCCAGAAAGCCCTTTTGTTTGTAACTTTCAACTGCATCAACTAGAGTT
TCCTCCAGTGGCCTATATTGCCAACCCAACTTCTGCAACTTCTCTGAACTAAAACTTGTATCCTCCATCATATCGGTAAA
ACTGTAAAATAAAAAATACATTTAGGACAACAGGTTTAGATATACGAGCAACTTCTATGCACAAGTGTAAGAGCGCAGTC
CACTAGTGATATTGTCCGATTTGAGCCTAGGCCTACACAGATTAAAATGTTTCACTAGGGTCTAAGGGTTTTTCCAGCAT
TTCTCTGGGTAACGCATTTTAAAGTTGTGTGGTCCTAGACCCAAAGTGGACAATATCACTAGTGGGCAAGGTAACACAAG
GATATTTATGAATATACTTAATCAAATAGACCAAGTTCACTACACAGCTTTTTGTAATTTCTTAACCAGACACACTGGAA
ATAAGAAATGAAATACCCATAAGAGAAGTCCCAATTTCCTTAAGCTGCTTTTTTTTTTCCTGCAACTCTTAAACTAGACA
CAGGAAATAGGACACTAGATTCCCAATAAAGAAGCATAAAGTGGAAAGGAGAGAAATTCACCATTTAGGATAGTAGTAGT
TGGGATAGTGTTTCTTCAGCATAGCAACTAAATCTTCTGATTTCACAGTATGAGCTGCACACAAGTATCTACCTTCAGCT
TCAGGTCTCTCATACACTAGCAGTAAGGCTTCAGCTACATCACGTACGTCTACCAAAAACCGTTTCTTGTTTTCCAGCTC
TTCGTATCCTTCTGTATCAACAACACAAAGAGAAGAAATGGCATCAGTCACTTCAAGCAAAAAAAGTATACATAAAAAGC
ACAGAAACAACACATGAAACCTTTAGCATAAAAAAATGCAAAGCAACTCAGATGATACAAAAATAAGTAGATATAATTAC
TTAAGTGCTTGTGCTCCTTTTAGGTAATAAATCTCGAGGTGAATGGAGAAAGAGCAAATACCTTGTTCTCACTGAAATAG
AAAAAGTTTGTTTATTTCAGCAAATGTTCTATATTCCTAGACTCTGAACCAGTTATTTATAATATCCATGACTAATAGGT
CAACTCGTTCTACACAGAAATTAACATTTACTACCATTAAACATGAAGCTTAGTACGTAGCTCTTGGTGCACAGTAGCTA
GGAGGTCATTTATCTAACAAGGCAATACACTCGAGAATCCATAGCAAAAGCGATGCTTGAAACACTAGAGTAGAAGGATG
ACCAAAAAAACACCTGAGAAATGCTTCTAACCAGCACTATAACAAACTGGCCTACTAAGCTTTACCAAATGACCTATACA
GCACATAACTTAAATTACAATGTCTCTCTGTCATATCAAATAATTGTGCAAGTAATTTAAAATAGAGGGGCTTTAGGCAG
TTGTCCAAAGCATCTAAGGGTATAAAGTGAATGTATACATAAGGAAGAACTCACTAACTAGTGCACTGAATTTGAAATAA
TAAATTTAACCAAATGTTATGGACAAAAAGTCTTTAGCTGCCACTAACCAACATATTAAGCATGAAAAACTACAATAGAC
CTAAACTCAGTGTCTCATATGAGCCAAAAAGCTGCACACCGATTCAGGATTTCAGGTTAGTCCACCTACATGGACAAACA
ATATTCTAGAAATTTCCTCTTGCAGCTTAGCTAATATGCCTCAAAGATAACTAGACATCACTGTTTATGCTTTCAATGAT
CTCTTGCTTATAGTCAACCACCAAGTAACTTGGATAACTAAAAGTCATATATGACAAAACTTTGTTATAGTTACACATAT
ATATCAACCTAGCACTTTAAAGCATAGGTAAAGAATTTAACAAAACACAAAACTGCATGCTAAATGTATGAACAACAGTC
CGTGCTCTCAAGGAAAAACAATTAAGAAGCTTGTGGGAAAAGTGAATTCTGATTACTCCCCAATGAGCAACTCACGCAAG
CAGAAATGTAGAAGTAGAAGAAATGATGCAGAAACATTAAAACAGTGAAGTATAACTATGGTTTCTTGGTACCTTTCAGC
AGCTTAATGAGAGCCAAGCTACTTGCATTTGTTGTCTTCTGTAACATTGGCCCTACAACAAGTGCTGGGAGCACAGTTAC
CATATCAAGTCCACTTTTCTTTGCATATGACCAAGCTTCTTTCTCAGCCATTGTTTTAGAAAAACAGTACCAGTTCTGCA
TGCATTTGGAACCACAAAATGCAATCAGATAGGAAGCTGCTCTAGCAAACTAAGCATTCAAGAGTCAAATGCAAATTCTT
CTTACAATAACTAAGCCAATCAAACAGGACACAGCTCAAGTAAATTAAGTATTCAAGATACAGATCATATATTATTTTAC
CAACACTTAAGTATCATATGTAAGAAACATGACTAATAATCTTAAATGTACACAGAAGTCAAATTCGCAAACTCGCATCG
TTAAAAGAAGCTACATTAGTTGCTTTGCAGTATTCACTGTCCGACCAACAAGTCTCGTCCTTCACTTGGCCCTTCGGCCA
GTTGGGGTCCAAGGAAGCAGCAGCAACAGAAGACACAAACACAACCCTCCTGATGTTTTCTTCAGAGCATGCCTTCAGAA
CATTAAGTGTGCCGTTCACTGCAGGCTCAACAAGTTCTACCTGCAATCAAGACATTGAACATATGAAGAATTTTACTTTC
TTTTTTTCTTTGGTGCAGAACTAGAGCAATAGTTGTTTTGAAAGCAACCTAGAAATGTTGATCACTATACAATTGTCTCC
TGGATGCACCAGATTTCCCAATGTCTTAGGTTCTCCAATAGGGAAGCTCCATAGAAGTGTCTCTTATTGCAAGTATTAAT
CACCGTGAAAAGATCTTTTTGAACATTACATCATATAAAATCCCAATATAAACTCACTATCCTGTCCTTCATTTTGTAGA
AAGACACCTCTAAGTGCTTTCAACAACTAATAACATGTGCTAAGATCACTATTCTAGACTGCTCATAAAGATTCCACTAA
TGTCTGGAGATTTACAAACTGAAACCACAGGATGTGATTAATATCAACGAAGTGAAGAAGCTGATAATATCTAAACTACA
GGACATGTATGGTGTCAGGGCCAACTTGTGTGCACTTCGACTCTTCCACCGGGTACCTTCTACCTCCCACTAGCAGTCTA
GAACCCATACCAGGTAATTCTGCACCAAGGTTTAACTATATGGAGAAAATCACCAAAGTATTTTTGTAACTACTGAGATT
TGAATCCTGGTGCAAGGTTTGCATCCACTTCATTGACCACTAGACAAACCGTCACAACCTTGAATTCATTGGCTTGTGCC
GGTTTATTAGTTTACTTTGTTTTAGATATTTAGAGATCCTAGCTTTGTCAATAATTTAATAGGTGGTAGCAGATTCATAC
CTCGGGATTTGGTACAGAGCCCGAAGGAACTGGACAAGCAACATGAAATACTCCATTGCATCCTTTGATGGCTCCAGCAA
GCGAGTTGGGATCTAGCAAGTCTGCCTTGAAGAGCTTAAGGTTGTCAGCAGCTTTATCAAGGTTCTTCAAATGAGCATAC
TTGTCATCAGCTGCAAATTAAATGGAATTGAGATTGATTTCTTAGGGATCTTCAATTCCATTGAAATAAAGGTCTAAAAT
TAGTACTCCTAGTTTGAAAACAAAGAAGAAGAAGAACAAAAACAGAGTGTTTTTAGATATTAAAAAGGGAAAACTTACAA
GGATCTCTGACGGTGCCATGAACAATGTAGTCTTTAGAAAGGAGAAGCTTCACTAGCGATGAAGCCACGTATCCACCTGC
GCCAGTTACACACACTCTGGATTTCTCCGCCATCAACGCCATGCCTCTGCGATTGTAATTTCTTCTTTTGTTTTCTCGTC
TTTACTCCAAATAGCTCATCCGGAATATTCACACTAAAC
Download sequence region |
Get flanking sequences on PGSC_DMv3_219_ch04
|
![]() ![]() |
Ontology terms | None | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>PGSC0003DMT400025902 Cinnamoyl-CoA reductase
CTCTTGAATGCTTAGTTTGCTAGAGCAGCTTCCTATCTGATTGCATTTTGTGGTTCCAAATGCATGCAGAACTGGTACTG
TTTTTCTAAAACAATGGCTGAGAAAGAAGCTTGGTCATATGCAAAGAAAAGTGGACTTGATATGGTAACTGTGCTCCCAG
CACTTGTTGTAGGGCCAATGTTACAGAAGACAACAAATGCAAGTAGCTTGGCTCTCATTAAGCTGCTGAAAGAAGGATAC
GAAGAGCTGGAAAACAAGAAACGGTTTTTGGTAGACGTACGTGATGTAGCTGAAGCCTTACTGCTAGTGTATGAGAGACC
TGAAGCTGAAGGTAGATACTTGTGTGCAGCTCATACTGTGAAATCAGAAGATTTAGTTGCTATGCTGAAGAAACACTATC
CCAACTACTACTATCCTAAATGTTTTACCGATATGATGGAGGATACAAGTTTTAGTTCAGAGAAGTTGCAGAAGTTGGGT
TGGCAATATAGGCCACTGGAGGAAACTCTAGTTGATGCAGTTGAAAGTTACAAACAAAAGGGCTTTCTGGATTGAAGTTT
GCTTGTTGTAATACTTTGTACTAAATAATTGCTCTGCATGTCTTTCAAGTTCATACACTTGCAAACTATTACCTATAATA
CATAGTCTGGAATAAGGAGGTTACACTATACCCCTTTTGAGTTCTATTTAGTTGTTTTATTTTGCTCTCAGTTGGGGGTA
CAGATTGCTCTCAACTTATTCAAGTACAACCTTGTATTTCTATTCCTAGAGCTTATGAGAATGTATCTTTAGTAGCTGGT
GTTTCTAGTGAAGGTGCTTGGCG
CTCTTGAATGCTTAGTTTGCTAGAGCAGCTTCCTATCTGATTGCATTTTGTGGTTCCAAATGCATGCAGAACTGGTACTG
TTTTTCTAAAACAATGGCTGAGAAAGAAGCTTGGTCATATGCAAAGAAAAGTGGACTTGATATGGTAACTGTGCTCCCAG
CACTTGTTGTAGGGCCAATGTTACAGAAGACAACAAATGCAAGTAGCTTGGCTCTCATTAAGCTGCTGAAAGAAGGATAC
GAAGAGCTGGAAAACAAGAAACGGTTTTTGGTAGACGTACGTGATGTAGCTGAAGCCTTACTGCTAGTGTATGAGAGACC
TGAAGCTGAAGGTAGATACTTGTGTGCAGCTCATACTGTGAAATCAGAAGATTTAGTTGCTATGCTGAAGAAACACTATC
CCAACTACTACTATCCTAAATGTTTTACCGATATGATGGAGGATACAAGTTTTAGTTCAGAGAAGTTGCAGAAGTTGGGT
TGGCAATATAGGCCACTGGAGGAAACTCTAGTTGATGCAGTTGAAAGTTACAAACAAAAGGGCTTTCTGGATTGAAGTTT
GCTTGTTGTAATACTTTGTACTAAATAATTGCTCTGCATGTCTTTCAAGTTCATACACTTGCAAACTATTACCTATAATA
CATAGTCTGGAATAAGGAGGTTACACTATACCCCTTTTGAGTTCTATTTAGTTGTTTTATTTTGCTCTCAGTTGGGGGTA
CAGATTGCTCTCAACTTATTCAAGTACAACCTTGTATTTCTATTCCTAGAGCTTATGAGAATGTATCTTTAGTAGCTGGT
GTTTCTAGTGAAGGTGCTTGGCG
![]() ![]() | translated polypeptide sequence |
>PGSC0003DMT400025902 Cinnamoyl-CoA reductase
MAEKEAWSYAKKSGLDMVTVLPALVVGPMLQKTTNASSLALIKLLKEGYEELENKKRFLVDVRDVAEALLLVYERPEAEG
RYLCAAHTVKSEDLVAMLKKHYPNYYYPKCFTDMMEDTSFSSEKLQKLGWQYRPLEETLVDAVESYKQKGFLD*
MAEKEAWSYAKKSGLDMVTVLPALVVGPMLQKTTNASSLALIKLLKEGYEELENKKRFLVDVRDVAEALLLVYERPEAEG
RYLCAAHTVKSEDLVAMLKKHYPNYYYPKCFTDMMEDTSFSSEKLQKLGWQYRPLEETLVDAVESYKQKGFLD*
![]() ![]() |
Ontology terms | None | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>PGSC0003DMT400025903 Cinnamoyl-CoA reductase
GTTTAGTGTGAATATTCCGGATGAGCTATTTGGAGTAAAGACGAGAAAACAAAAGAAGAAATTACAATCGCAGAGGCATG
GCGTTGATGGCGGAGAAATCCAGAGTGTGTGTAACTGGCGCAGGTGGATACGTGGCTTCATCGCTAGTGAAGCTTCTCCT
TTCTAAAGACTACATTGTTCATGGCACCGTCAGAGATCCTTATCCCTAAGAAATCAATCTCAATTCCATTTAATTTGCAG
CTGATGACAAGTATGCTCATTTGAAGAACCTTGATAAAGCTGCTGACAACCTTAAGCTCTTCAAGGCAGACTTGCTAGAT
CCCAACTCGCTTGCTGGAGCCATCAAAGGATGCAATGGAGTATTTCATGTTGCTTGTCCAGTTCCTTCGGGCTCTGTACC
AAATCCCGAGGTAGAACTTGTTGAGCCTGCAGTGAACGGCACACTTAATGTTCTGAAGGCATGCTCTGAAGAAAACATCA
GGAGGGTTGTGTTTGTGTCTTCTGTTGCTGCTGCTTCCTTGGACCCCAACTGGCCGAAGGGCCAAGTGAAGGACGAGACT
TGTTGGTCGGACAGTGAATACTGCAAAGCAACTAATAACTGGTACTGTTTTTCTAAAACAATGGCTGAGAAAGAAGCTTG
GTCATATGCAAAGAAAAGTGGACTTGATATGGTAACTGTGCTCCCAGCACTTGTTGTAGGGCCAATGTTACAGAAGACAA
CAAATGCAAGTAGCTTGGCTCTCATTAAGCTGCTGAAAGAAGGATACGAAGAGCTGGAAAACAAGAAACGGTTTTTGGTA
GACGTACGTGATGTAGCTGAAGCCTTACTGCTAGTGTATGAGAGACCTGAAGCTGAAGGTAGATACTTGTGTGCAGCTCA
TACTGTGAAATCAGAAGATTTAGTTGCTATGCTGAAGAAACACTATCCCAACTACTACTATCCTAAATGTTTTACCGATA
TGATGGAGGATACAAGTTTTAGTTCAGAGAAGTTGCAGAAGTTGGGTTGGCAATATAGGCCACTGGAGGAAACTCTAGTT
GATGCAGTTGAAAGTTACAAACAAAAGGGCTTTCTGGATTGAAGTTTGCTTGTTGTAATACTTTGTACTAAATAATTGCT
CTGCATGTCTTTCAAGTTCATACACTTGCAAACTATTACCTATAATACATAGTCTGGAATAAGGAGGTTACACTATACCC
CTTTTGAGTTCTATTTAGTTGTTTTATTTTGCTCTCAGTTGGGGGTACAGATTGCTCTCAACTTATTCAAGTACAACCTT
GTATTTCTATTCCTAGAGCTTATGAGAATGTATCTTTAGTAGCTGGTGTTTCTAGTGAAGGTGCTTGGCG
GTTTAGTGTGAATATTCCGGATGAGCTATTTGGAGTAAAGACGAGAAAACAAAAGAAGAAATTACAATCGCAGAGGCATG
GCGTTGATGGCGGAGAAATCCAGAGTGTGTGTAACTGGCGCAGGTGGATACGTGGCTTCATCGCTAGTGAAGCTTCTCCT
TTCTAAAGACTACATTGTTCATGGCACCGTCAGAGATCCTTATCCCTAAGAAATCAATCTCAATTCCATTTAATTTGCAG
CTGATGACAAGTATGCTCATTTGAAGAACCTTGATAAAGCTGCTGACAACCTTAAGCTCTTCAAGGCAGACTTGCTAGAT
CCCAACTCGCTTGCTGGAGCCATCAAAGGATGCAATGGAGTATTTCATGTTGCTTGTCCAGTTCCTTCGGGCTCTGTACC
AAATCCCGAGGTAGAACTTGTTGAGCCTGCAGTGAACGGCACACTTAATGTTCTGAAGGCATGCTCTGAAGAAAACATCA
GGAGGGTTGTGTTTGTGTCTTCTGTTGCTGCTGCTTCCTTGGACCCCAACTGGCCGAAGGGCCAAGTGAAGGACGAGACT
TGTTGGTCGGACAGTGAATACTGCAAAGCAACTAATAACTGGTACTGTTTTTCTAAAACAATGGCTGAGAAAGAAGCTTG
GTCATATGCAAAGAAAAGTGGACTTGATATGGTAACTGTGCTCCCAGCACTTGTTGTAGGGCCAATGTTACAGAAGACAA
CAAATGCAAGTAGCTTGGCTCTCATTAAGCTGCTGAAAGAAGGATACGAAGAGCTGGAAAACAAGAAACGGTTTTTGGTA
GACGTACGTGATGTAGCTGAAGCCTTACTGCTAGTGTATGAGAGACCTGAAGCTGAAGGTAGATACTTGTGTGCAGCTCA
TACTGTGAAATCAGAAGATTTAGTTGCTATGCTGAAGAAACACTATCCCAACTACTACTATCCTAAATGTTTTACCGATA
TGATGGAGGATACAAGTTTTAGTTCAGAGAAGTTGCAGAAGTTGGGTTGGCAATATAGGCCACTGGAGGAAACTCTAGTT
GATGCAGTTGAAAGTTACAAACAAAAGGGCTTTCTGGATTGAAGTTTGCTTGTTGTAATACTTTGTACTAAATAATTGCT
CTGCATGTCTTTCAAGTTCATACACTTGCAAACTATTACCTATAATACATAGTCTGGAATAAGGAGGTTACACTATACCC
CTTTTGAGTTCTATTTAGTTGTTTTATTTTGCTCTCAGTTGGGGGTACAGATTGCTCTCAACTTATTCAAGTACAACCTT
GTATTTCTATTCCTAGAGCTTATGAGAATGTATCTTTAGTAGCTGGTGTTTCTAGTGAAGGTGCTTGGCG
![]() ![]() | translated polypeptide sequence |
>PGSC0003DMT400025903 Cinnamoyl-CoA reductase
MAEKEAWSYAKKSGLDMVTVLPALVVGPMLQKTTNASSLALIKLLKEGYEELENKKRFLVDVRDVAEALLLVYERPEAEG
RYLCAAHTVKSEDLVAMLKKHYPNYYYPKCFTDMMEDTSFSSEKLQKLGWQYRPLEETLVDAVESYKQKGFLD*
MAEKEAWSYAKKSGLDMVTVLPALVVGPMLQKTTNASSLALIKLLKEGYEELENKKRFLVDVRDVAEALLLVYERPEAEG
RYLCAAHTVKSEDLVAMLKKHYPNYYYPKCFTDMMEDTSFSSEKLQKLGWQYRPLEETLVDAVESYKQKGFLD*
![]() ![]() |
Ontology terms | None | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>PGSC0003DMT400025904 Cinnamoyl-CoA reductase
GTTTAGTGTGAATATTCCGGATGAGCTATTTGGAGTAAAGACGAGAAAACAAAAGAAGAAATTACAATCGCAGAGGCATG
GCGTTGATGGCGGAGAAATCCAGAGTGTGTGTAACTGGCGCAGGTGGATACGTGGCTTCATCGCTAGTGAAGCTTCTCCT
TTCTAAAGACTACATTGTTCATGGCACCGTCAGAGATCCTTCTGATGACAAGTATGCTCATTTGAAGAACCTTGATAAAG
CTGCTGACAACCTTAAGCTCTTCAAGGCAGACTTGCTAGATCCCAACTCGCTTGCTGGAGCCATCAAAGGATGCAATGGA
GTATTTCATGTTGCTTGTCCAGTTCCTTCGGGCTCTGTACCAAATCCCGAGGTAGAACTTGTTGAGCCTGCAGTGAACGG
CACACTTAATGTTCTGAAGGCATGCTCTGAAGAAAACATCAGGAGGGTTGTGTTTGTGTCTTCTGTTGCTGCTGCTTCCT
TGGACCCCAACTGGCCGAAGGGCCAAGTGAAGGACGAGACTTGTTGGTCGGACAGTGAATACTGCAAAGCAACTAATAAC
TGGTACTGTTTTTCTAAAACAATGGCTGAGAAAGAAGCTTGGTCATATGCAAAGAAAAGTGGACTTGATATGGTAACTGT
GCTCCCAGCACTTGTTGTAGGGCCAATGTTACAGAAGACAACAAATGCAAGTAGCTTGGCTCTCATTAAGCTGCTGAAAG
AAGGATACGAAGAGCTGGAAAACAAGAAACGGTTTTTGGTAGACGTACGTGATGTAGCTGAAGCCTTACTGCTAGTGTAT
GAGAGACCTGAAGCTGAAGGTAGATACTTGTGTGCAGCTCATACTGTGAAATCAGAAGATTTAGTTGCTATGCTGAAGAA
ACACTATCCCAACTACTACTATCCTAAATGTTTTACCGATATGATGGAGGATACAAGTTTTAGTTCAGAGAAGTTGCAGA
AGTTGGGTTGGCAATATAGGCCACTGGAGGAAACTCTAGTTGATGCAGTTGAAAGTTACAAACAAAAGGGCTTTCTGGAT
TGAAGTTTGCTTGTTGTAATACTTTGTACTAAATAATTGCTCTGCATGTCTTTCAAGTTCATACACTTGCAAACTATTAC
CTATAATACATAGTCTGGAATAAGGAGGTTACACTATACCCCTTTTGAGTTCTATTTAGTTGTTTTATTTTGCTCTCAGT
TGGGGGTACAGATTGCTCTCAACTTATTCAAGTACAACCTTGTATTTCTATTCCTAGAGCTTATGAGAATGTATCTTTAG
TAGCTGGTGTTTCTAGTGAAGGTGCTTGGCG
GTTTAGTGTGAATATTCCGGATGAGCTATTTGGAGTAAAGACGAGAAAACAAAAGAAGAAATTACAATCGCAGAGGCATG
GCGTTGATGGCGGAGAAATCCAGAGTGTGTGTAACTGGCGCAGGTGGATACGTGGCTTCATCGCTAGTGAAGCTTCTCCT
TTCTAAAGACTACATTGTTCATGGCACCGTCAGAGATCCTTCTGATGACAAGTATGCTCATTTGAAGAACCTTGATAAAG
CTGCTGACAACCTTAAGCTCTTCAAGGCAGACTTGCTAGATCCCAACTCGCTTGCTGGAGCCATCAAAGGATGCAATGGA
GTATTTCATGTTGCTTGTCCAGTTCCTTCGGGCTCTGTACCAAATCCCGAGGTAGAACTTGTTGAGCCTGCAGTGAACGG
CACACTTAATGTTCTGAAGGCATGCTCTGAAGAAAACATCAGGAGGGTTGTGTTTGTGTCTTCTGTTGCTGCTGCTTCCT
TGGACCCCAACTGGCCGAAGGGCCAAGTGAAGGACGAGACTTGTTGGTCGGACAGTGAATACTGCAAAGCAACTAATAAC
TGGTACTGTTTTTCTAAAACAATGGCTGAGAAAGAAGCTTGGTCATATGCAAAGAAAAGTGGACTTGATATGGTAACTGT
GCTCCCAGCACTTGTTGTAGGGCCAATGTTACAGAAGACAACAAATGCAAGTAGCTTGGCTCTCATTAAGCTGCTGAAAG
AAGGATACGAAGAGCTGGAAAACAAGAAACGGTTTTTGGTAGACGTACGTGATGTAGCTGAAGCCTTACTGCTAGTGTAT
GAGAGACCTGAAGCTGAAGGTAGATACTTGTGTGCAGCTCATACTGTGAAATCAGAAGATTTAGTTGCTATGCTGAAGAA
ACACTATCCCAACTACTACTATCCTAAATGTTTTACCGATATGATGGAGGATACAAGTTTTAGTTCAGAGAAGTTGCAGA
AGTTGGGTTGGCAATATAGGCCACTGGAGGAAACTCTAGTTGATGCAGTTGAAAGTTACAAACAAAAGGGCTTTCTGGAT
TGAAGTTTGCTTGTTGTAATACTTTGTACTAAATAATTGCTCTGCATGTCTTTCAAGTTCATACACTTGCAAACTATTAC
CTATAATACATAGTCTGGAATAAGGAGGTTACACTATACCCCTTTTGAGTTCTATTTAGTTGTTTTATTTTGCTCTCAGT
TGGGGGTACAGATTGCTCTCAACTTATTCAAGTACAACCTTGTATTTCTATTCCTAGAGCTTATGAGAATGTATCTTTAG
TAGCTGGTGTTTCTAGTGAAGGTGCTTGGCG
![]() ![]() | translated polypeptide sequence |
>PGSC0003DMT400025904 Cinnamoyl-CoA reductase
MALMAEKSRVCVTGAGGYVASSLVKLLLSKDYIVHGTVRDPSDDKYAHLKNLDKAADNLKLFKADLLDPNSLAGAIKGCN
GVFHVACPVPSGSVPNPEVELVEPAVNGTLNVLKACSEENIRRVVFVSSVAAASLDPNWPKGQVKDETCWSDSEYCKATN
NWYCFSKTMAEKEAWSYAKKSGLDMVTVLPALVVGPMLQKTTNASSLALIKLLKEGYEELENKKRFLVDVRDVAEALLLV
YERPEAEGRYLCAAHTVKSEDLVAMLKKHYPNYYYPKCFTDMMEDTSFSSEKLQKLGWQYRPLEETLVDAVESYKQKGFL
D*
MALMAEKSRVCVTGAGGYVASSLVKLLLSKDYIVHGTVRDPSDDKYAHLKNLDKAADNLKLFKADLLDPNSLAGAIKGCN
GVFHVACPVPSGSVPNPEVELVEPAVNGTLNVLKACSEENIRRVVFVSSVAAASLDPNWPKGQVKDETCWSDSEYCKATN
NWYCFSKTMAEKEAWSYAKKSGLDMVTVLPALVVGPMLQKTTNASSLALIKLLKEGYEELENKKRFLVDVRDVAEALLLV
YERPEAEGRYLCAAHTVKSEDLVAMLKKHYPNYYYPKCFTDMMEDTSFSSEKLQKLGWQYRPLEETLVDAVESYKQKGFL
D*
![]() ![]() |
![]() ![]() | [Associate new unigene] |
Unigene ID:
SGN-U275298 Solanum tuberosum -- build 4 -- 5 members [Remove] [Blast]
SGN-U289171 Solanum tuberosum -- build 4 -- 1 members [Remove] [Blast]
SGN-U292627 Solanum tuberosum -- build 4 -- 1 members [Remove] [Blast]
SGN-U289171 Solanum tuberosum -- build 4 -- 1 members [Remove] [Blast]
SGN-U292627 Solanum tuberosum -- build 4 -- 1 members [Remove] [Blast]
![]() ![]() | [Associate new genbank sequence] |
AY149609 Solanum tuberosum cultivar Kuras cinnamoyl CoA reductase 2 mRNA, partial cds.
Other genome matches | None |
![]() ![]() | [Associate publication] [Matching publications] |
Molecular cloning and characterization of cDNAs encoding cinnamoyl CoA reductase (CCR) from barley (Hordeum vulgare) and potato (Solanum tuberosum).
Journal of plant physiology (2004)
Show / hide abstract
Show / hide abstract
Cinnamoyl CoA reductase catalyzes the reduction of cinnamic acid CoA esters into their corresponding aldehydes, the first step of the phenylpropanoid pathway specifically dedicated to monolignol biosynthesis. Two cDNA clones encoding cinnamoyl CoA reductase (CCR) have been isolated from Hordeum vulgare (HvCCR) and Solanum tuberosum (StCCR1). Amino acid sequence alignment revealed the motif, NWYCY, representing the active site of CCR, conserved in both the encoded HvCCR and StCCR1 amino acid sequences. The HvCCR encoded protein possesses substantial homology with CCRs isolated and cloned form other sources; the highest identity (89%) was observed with CCR from fescue (Festuca arundicinea). Expression analysis by RT-PCR demonstrated that the HvCCR gene is expressed in barley stem and root tissue while no expression is detected in leaves and flowers. This expression pattern suggests that HvCCR is involved in constitutive lignification. Transcripts of StCCR1 were detected in potato root, leaf and also in stem although at a very low level.
Larsen, K.
Journal of plant physiology.
2004.
161(1).
105-12.
![]() ![]() | [Add ontology annotations] |
biological_process
|
cellular_component
|
molecular_function
|
![]() ![]() |
none found
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