This site uses cookies to provide logins and other features. Please accept the use of cookies by clicking Accept.
Tomato locus Glucose-6-phosphate translocator
Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
[loading edit links...]
|
[loading...]
|
|
![]() ![]() |
Glucose-6-phosphate translocator is on PhyloGenes
TomDelDB genotype frequencies in tomato populations. chromosome SL2.50ch01, position: 5154257
Please cite Razifard et al.
Registry name: | None | [Associate registry name] |
![]() ![]() | [Add notes, figures or images] |
Success
The display image was set successfully.
Image | Description | Type |
---|
![]() ![]() | [Associate accession] |
Accession name:
Would you Like to specify an allele?
Alleles (0) | None | [Add new Allele] |
![]() ![]() | [Associate new locus] |
[loading...]
|
![]() ![]() | View Glucose-6-phosphate translocator relationships in the stand-alone network browser |
[loading...] | [Legend] [Levels] |
![]() ![]() |
![]() ![]() |
![]() ![]() |
![]() ![]() | unprocessed genomic sequence region underlying this gene |
>Solyc01g010350.2 SL2.50ch01:5158097..5153980 (sequence from reverse strand)
GAATTTTCATTATGGCTTCAATCTCTAATTCCTTTCACTTTTCTCTAAAAAGATCAAATTTTTATTCTTCTTCATCCCAC
AAACTTATTAATAGAAATTTAACTAATTCAGTTTCACTCAAAAATTTGTCAATAATTGCAAATTCCAAAAACTTTGAATC
AATTAAGCCTAAATGCAGTCAATTATTGAAGCCAAGAAATAGTGTTGATGTTTTTGTTACAAAAGCAGTAGCTGCTGATG
CAGAGGGTCATGACATTGAAATTACTGATGGGTTTGTTTTATTTTGTTTTGTTAATTTTATTTATTTATACTTTCATTAC
ATTTTTTTTTGGCTAATTAATTATCAATTTTGTATGTAGGTATGTTAAACCAACTAAAGGATTTGCTGAAAAATTTCCAG
CTCTAGTTACTGGATTCTTTTTCTTTACATGGTGAGCTTTACTTATTGAACAAGTAGATATACATGTCTTACATGACAAA
TCACATGACATGACGTGTTCTATCTGTCAAATCATGTGAGACTGCTGTGTAGTAAACATGTGTTTATTTGTTCAATTTTT
ATAATACTTGTGTAGACTCAAAAGTCTGAAGATCAAGTTAAATGACGTGTTTATGTATTATCTTTTAGATAAAATTGTGA
CACACTTTAATGTGATATCAGACCAGACATGAAGAATTTCACGAAAAAGAATGAGATTTGCATACGAGGGGCGTGTTGAG
TATATTATCAAGTGAATAAAAGTGTACTCTTTCAAATATTTTAAGCTTTTAGATAAGATAGACACAACTTCAACAAGGAT
AAACGAGTTTTTGGACTGATAGATCTTTTTCTCTCTTTAAAGAGTTAGAACCTATTTGGATTGACTTTAAAAAAGCAGTT
TTTAAGTCCAAAATTAAAAATCAAACTAAAATGACTTTTAAGTCAAAAATAAAAAGTGGGGGAGGCCTACTTTTGATTTT
TGACTTATTTTAAGTCATTTTAAACTTATGTCATTTTTACCTTGTTAAACATTTTTCAACTTATCTTAAGTCATCTTTTT
ACTTATTTTAAATTATTTTTTATATTTATCAAACCCTTCGAGAAAACAAAAACTGACTTAAAAGTAAGTTTCATAAACTT
TAAGTCAATCCAAACACCCCACTTAGAGTTATTTTGGGGAGGGGTGAGGGCAAGGGTGGAGCCAGCTTAGGGTCAGGCGG
TTCATCCTAACCCCCTTCATAAGAAATTATATTATTTATATATGGCTTAAATTAATTTTTATGTACATATAATAGGTGTC
GAACCCTTTTCGACTAGTTCATCTGTTTACTTCTTCAGATTTTAAACTCTCTTAATAAAAATTTTGGCTCTGCTATTAGG
TGAGTGTAAGTGGAATATGGCTTGAGAAGGTAAAAATGAGTACTGATCATCAAGTTTGCTGATGCAGGTACTTTCTGAAT
GTGATTTTCAACATACTCAACAAGAAAGTATACAACTATTTCCCATACCCATAGTAAGTGGCTATTGTTATTTAGGAGAT
TCTCAAATCAAATATCATGTTCTTGCAAAGAAAAAATTAAGCTTATATGATTTTCTTGCAGCTTCGTTTCAGTTGTACAT
CTCCTAGTTGGAGTAACCTATTGTCTTATTAGTTGGACCGTTGGTCTACCTAAACGTGCGGTAAGTTCATCCATATATAT
ACAAGTAAACTTCCTTAAAAAGTGAGATACACAAGTTAGATTGACGATGTATATAACTCAAACTCTTTTGTTAATTTGCT
CAAAGCTGGCTTTAATTGACTTGCATTTGTCAAAAATATGTGACTATAGCCCATCAATAAGGAACTTCTGGCACTGCTTA
CTCCGGTAGCATTCTGTCATGCTCTTGGACATGTTATGTCTAATGTGTCGTTTGCAACTGTTGCTGTATCCTTCACTCAT
ACCATCAAAGGTAATAACCCATAAATACACACTACTTTAGTTCGATAAGTTTTTCTTTTTGAATAACAGATGCTTGTAAC
TTTATATGGTTCAAATGAGTGCTTCGTTCTTAAAGATGAGCAGTGGTCTAGAGCTAAGCATATTAGGAGCAGGAAAAATT
ACCTTAAGTTGACATCGATAGTACTTCTTAACGATATATGGCTTCAAGAATTAAATGTGATATAAGAAATCAGTTAAGAA
TACTTCATTACGTCAACATGTTCTGCAATAACTGACATTTTGTCATTGGTGTTGCATAGCTCTGGAGCCATTCTTCAGTG
CTTCGGCTTCTCAGTTTGTCTTGGGCCACCAGATCCCCGTCTCTCTGTGGTTATCACTGGCCCCTGTTGTCATTGGTAAG
TGTCATATACAGGCATTGTGATTTTCCCTTCACTAGTTCAAACATTTACCAACTGCTCAAGAAAATCGTCGCTGTTGAGG
CAAAACAAGAGCAACTTTTTGATGTTATATCATAAGTAATATATTATGCGCGTTTGTCGAATGAACAACAAATCCTCAAC
ACTGAGGTTCTGCTTCATTCCCCTTTCTGATCTAGCCTGCTCAAATTCTGATCAAAACAATATTGTTGATTACTGATACT
TCTTAGGTGTATCGATGGCGTCGTTGACTGAACTATCGTTCAATTGGACTGGCTTCATTAGTGCAATGATCTCAAATATT
GCTTTCACTTACAGAAGTATCTACTCAAAGAAAGCAATGGTAAGTGTTCTTCTCATAGAGTAATACTGCCAAGCATTACC
TTAAGCATGTCGTATACATTCAGGGTAGCCTAATTGACAGACCCCTTCATAATCTCCTCCTACAAAAATTTTGTCGTCTT
ATTAGGTTAGATTAATACAGACATGAACGGGAGTGTTGAAGCAACAATAAAGTTATCTTTGGGTTAAATAGGTCACGGGT
TCGATCCATAGAATCAACCACTCATACTTGCATCAAGGTAGGCAGCCTGCTGCATCATACCCCCATGGGGTGCGGCCCTT
CTTCCTACCCCGCGTGAACACGGAATGTTTTATGTATCGGGCTGTTTTTTTGGTCGTTTACTTTCTAATATACATCATCG
AGGAGATTGCTCACATGTTGATTAAGCAGGCGAAACAAGTAGGACAGTTTTAGTTTTCTCAAATTATCTTTGTGAAGTGT
CTTCTATCCTGCATAGCAGAGTATTTATGTTACATTTTGTAATTTATTATCATATGGTATGTTGTTTTTAACAGACTGGA
ATGGACAGCACAAATGTATACGCGTATATTTCAATTATCGCCCTCCTCTTTTGCCTCCCTCCAGCAATATTTGTAAGTAA
TTTTTTCTCAGAAATTCGTAAAACCTTCTCTGTCAGAGTATTTTCAAGATAGAACTAATTGGCAAATGCAATGTCAGATT
GAAGGACCTCAACTACTGCAGTACGGTTTCCGCGATGCTATTGCTAAAGTAGGTCTTTATAAGTTCTTATCCGACCTTTT
GTGGATCGGGATGTTCTATCATCTGTATAACCAGGTACACCACGAGTACGTAATGTATCAACACATTAGCTTTTTTTTCA
ATAGAGTTGGAAATTCGTTAAGTCTTTTAACATTTGCAGATAGCTACTAACACCTTAGAGCGTGTAGCGCCACTTACACA
TGCTGTTGGAAATGTGTTGAAGCGAGTGTTTGTGATTGGTTTCTCTATAGTAGTATTTGGTAAGTGTTGATTAAATAACA
CGCAATTTGTTGCTCGGGTATGGCAGTTTGTTCTGTGCTTTAATTGTTTGAAAACTTCGCAGGAAACAAGATATCGACTC
AAACTGGGATTGGTACTGCAATAGCTATTGCTGGTGTTGCTATCTACTCGTTAATAAAGGCAAGGATGGAAGAGCAAAAA
CGGGTTAGTCCTCGAAAGCATATCATCATCTGAATAGAAGTAGCTAGTAGAAAATTGAATACGAGTGCACAAAATTGCCT
CAACGGTCTTGTCTATTTTCAGAAGGCTTCTGCCCTTGCTCATGAACAATAGCGGGAGGACTAACAAAGACGAAGATGGT
AAGAGTGAACACTAGAAGAGTATGAGGCAGCGCGGAGATGATCTGATAAATGCAGTAAGAATAGTTAATGTCGTCTCAGC
TATGGCTTTCAATTATGTTAAGTTTATTTGTTCTTCTG
GAATTTTCATTATGGCTTCAATCTCTAATTCCTTTCACTTTTCTCTAAAAAGATCAAATTTTTATTCTTCTTCATCCCAC
AAACTTATTAATAGAAATTTAACTAATTCAGTTTCACTCAAAAATTTGTCAATAATTGCAAATTCCAAAAACTTTGAATC
AATTAAGCCTAAATGCAGTCAATTATTGAAGCCAAGAAATAGTGTTGATGTTTTTGTTACAAAAGCAGTAGCTGCTGATG
CAGAGGGTCATGACATTGAAATTACTGATGGGTTTGTTTTATTTTGTTTTGTTAATTTTATTTATTTATACTTTCATTAC
ATTTTTTTTTGGCTAATTAATTATCAATTTTGTATGTAGGTATGTTAAACCAACTAAAGGATTTGCTGAAAAATTTCCAG
CTCTAGTTACTGGATTCTTTTTCTTTACATGGTGAGCTTTACTTATTGAACAAGTAGATATACATGTCTTACATGACAAA
TCACATGACATGACGTGTTCTATCTGTCAAATCATGTGAGACTGCTGTGTAGTAAACATGTGTTTATTTGTTCAATTTTT
ATAATACTTGTGTAGACTCAAAAGTCTGAAGATCAAGTTAAATGACGTGTTTATGTATTATCTTTTAGATAAAATTGTGA
CACACTTTAATGTGATATCAGACCAGACATGAAGAATTTCACGAAAAAGAATGAGATTTGCATACGAGGGGCGTGTTGAG
TATATTATCAAGTGAATAAAAGTGTACTCTTTCAAATATTTTAAGCTTTTAGATAAGATAGACACAACTTCAACAAGGAT
AAACGAGTTTTTGGACTGATAGATCTTTTTCTCTCTTTAAAGAGTTAGAACCTATTTGGATTGACTTTAAAAAAGCAGTT
TTTAAGTCCAAAATTAAAAATCAAACTAAAATGACTTTTAAGTCAAAAATAAAAAGTGGGGGAGGCCTACTTTTGATTTT
TGACTTATTTTAAGTCATTTTAAACTTATGTCATTTTTACCTTGTTAAACATTTTTCAACTTATCTTAAGTCATCTTTTT
ACTTATTTTAAATTATTTTTTATATTTATCAAACCCTTCGAGAAAACAAAAACTGACTTAAAAGTAAGTTTCATAAACTT
TAAGTCAATCCAAACACCCCACTTAGAGTTATTTTGGGGAGGGGTGAGGGCAAGGGTGGAGCCAGCTTAGGGTCAGGCGG
TTCATCCTAACCCCCTTCATAAGAAATTATATTATTTATATATGGCTTAAATTAATTTTTATGTACATATAATAGGTGTC
GAACCCTTTTCGACTAGTTCATCTGTTTACTTCTTCAGATTTTAAACTCTCTTAATAAAAATTTTGGCTCTGCTATTAGG
TGAGTGTAAGTGGAATATGGCTTGAGAAGGTAAAAATGAGTACTGATCATCAAGTTTGCTGATGCAGGTACTTTCTGAAT
GTGATTTTCAACATACTCAACAAGAAAGTATACAACTATTTCCCATACCCATAGTAAGTGGCTATTGTTATTTAGGAGAT
TCTCAAATCAAATATCATGTTCTTGCAAAGAAAAAATTAAGCTTATATGATTTTCTTGCAGCTTCGTTTCAGTTGTACAT
CTCCTAGTTGGAGTAACCTATTGTCTTATTAGTTGGACCGTTGGTCTACCTAAACGTGCGGTAAGTTCATCCATATATAT
ACAAGTAAACTTCCTTAAAAAGTGAGATACACAAGTTAGATTGACGATGTATATAACTCAAACTCTTTTGTTAATTTGCT
CAAAGCTGGCTTTAATTGACTTGCATTTGTCAAAAATATGTGACTATAGCCCATCAATAAGGAACTTCTGGCACTGCTTA
CTCCGGTAGCATTCTGTCATGCTCTTGGACATGTTATGTCTAATGTGTCGTTTGCAACTGTTGCTGTATCCTTCACTCAT
ACCATCAAAGGTAATAACCCATAAATACACACTACTTTAGTTCGATAAGTTTTTCTTTTTGAATAACAGATGCTTGTAAC
TTTATATGGTTCAAATGAGTGCTTCGTTCTTAAAGATGAGCAGTGGTCTAGAGCTAAGCATATTAGGAGCAGGAAAAATT
ACCTTAAGTTGACATCGATAGTACTTCTTAACGATATATGGCTTCAAGAATTAAATGTGATATAAGAAATCAGTTAAGAA
TACTTCATTACGTCAACATGTTCTGCAATAACTGACATTTTGTCATTGGTGTTGCATAGCTCTGGAGCCATTCTTCAGTG
CTTCGGCTTCTCAGTTTGTCTTGGGCCACCAGATCCCCGTCTCTCTGTGGTTATCACTGGCCCCTGTTGTCATTGGTAAG
TGTCATATACAGGCATTGTGATTTTCCCTTCACTAGTTCAAACATTTACCAACTGCTCAAGAAAATCGTCGCTGTTGAGG
CAAAACAAGAGCAACTTTTTGATGTTATATCATAAGTAATATATTATGCGCGTTTGTCGAATGAACAACAAATCCTCAAC
ACTGAGGTTCTGCTTCATTCCCCTTTCTGATCTAGCCTGCTCAAATTCTGATCAAAACAATATTGTTGATTACTGATACT
TCTTAGGTGTATCGATGGCGTCGTTGACTGAACTATCGTTCAATTGGACTGGCTTCATTAGTGCAATGATCTCAAATATT
GCTTTCACTTACAGAAGTATCTACTCAAAGAAAGCAATGGTAAGTGTTCTTCTCATAGAGTAATACTGCCAAGCATTACC
TTAAGCATGTCGTATACATTCAGGGTAGCCTAATTGACAGACCCCTTCATAATCTCCTCCTACAAAAATTTTGTCGTCTT
ATTAGGTTAGATTAATACAGACATGAACGGGAGTGTTGAAGCAACAATAAAGTTATCTTTGGGTTAAATAGGTCACGGGT
TCGATCCATAGAATCAACCACTCATACTTGCATCAAGGTAGGCAGCCTGCTGCATCATACCCCCATGGGGTGCGGCCCTT
CTTCCTACCCCGCGTGAACACGGAATGTTTTATGTATCGGGCTGTTTTTTTGGTCGTTTACTTTCTAATATACATCATCG
AGGAGATTGCTCACATGTTGATTAAGCAGGCGAAACAAGTAGGACAGTTTTAGTTTTCTCAAATTATCTTTGTGAAGTGT
CTTCTATCCTGCATAGCAGAGTATTTATGTTACATTTTGTAATTTATTATCATATGGTATGTTGTTTTTAACAGACTGGA
ATGGACAGCACAAATGTATACGCGTATATTTCAATTATCGCCCTCCTCTTTTGCCTCCCTCCAGCAATATTTGTAAGTAA
TTTTTTCTCAGAAATTCGTAAAACCTTCTCTGTCAGAGTATTTTCAAGATAGAACTAATTGGCAAATGCAATGTCAGATT
GAAGGACCTCAACTACTGCAGTACGGTTTCCGCGATGCTATTGCTAAAGTAGGTCTTTATAAGTTCTTATCCGACCTTTT
GTGGATCGGGATGTTCTATCATCTGTATAACCAGGTACACCACGAGTACGTAATGTATCAACACATTAGCTTTTTTTTCA
ATAGAGTTGGAAATTCGTTAAGTCTTTTAACATTTGCAGATAGCTACTAACACCTTAGAGCGTGTAGCGCCACTTACACA
TGCTGTTGGAAATGTGTTGAAGCGAGTGTTTGTGATTGGTTTCTCTATAGTAGTATTTGGTAAGTGTTGATTAAATAACA
CGCAATTTGTTGCTCGGGTATGGCAGTTTGTTCTGTGCTTTAATTGTTTGAAAACTTCGCAGGAAACAAGATATCGACTC
AAACTGGGATTGGTACTGCAATAGCTATTGCTGGTGTTGCTATCTACTCGTTAATAAAGGCAAGGATGGAAGAGCAAAAA
CGGGTTAGTCCTCGAAAGCATATCATCATCTGAATAGAAGTAGCTAGTAGAAAATTGAATACGAGTGCACAAAATTGCCT
CAACGGTCTTGTCTATTTTCAGAAGGCTTCTGCCCTTGCTCATGAACAATAGCGGGAGGACTAACAAAGACGAAGATGGT
AAGAGTGAACACTAGAAGAGTATGAGGCAGCGCGGAGATGATCTGATAAATGCAGTAAGAATAGTTAATGTCGTCTCAGC
TATGGCTTTCAATTATGTTAAGTTTATTTGTTCTTCTG
Download sequence region |
Get flanking sequences on SL2.50ch01
|
![]() ![]() |
![]() ![]() | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>Solyc01g010350.2.1 Glucose-6-phosphate/phosphate translocator (AHRD V1 **** Q7XY15_WHEAT); contains Interpro domain(s) IPR004696 Tpt phosphate/phosphoenolpyruvate translocator
GAATTTTCATTATGGCTTCAATCTCTAATTCCTTTCACTTTTCTCTAAAAAGATCAAATTTTTATTCTTCTTCATCCCAC
AAACTTATTAATAGAAATTTAACTAATTCAGTTTCACTCAAAAATTTGTCAATAATTGCAAATTCCAAAAACTTTGAATC
AATTAAGCCTAAATGCAGTCAATTATTGAAGCCAAGAAATAGTGTTGATGTTTTTGTTACAAAAGCAGTAGCTGCTGATG
CAGAGGGTCATGACATTGAAATTACTGATGGGTATGTTAAACCAACTAAAGGATTTGCTGAAAAATTTCCAGCTCTAGTT
ACTGGATTCTTTTTCTTTACATGGTACTTTCTGAATGTGATTTTCAACATACTCAACAAGAAAGTATACAACTATTTCCC
ATACCCATACTTCGTTTCAGTTGTACATCTCCTAGTTGGAGTAACCTATTGTCTTATTAGTTGGACCGTTGGTCTACCTA
AACGTGCGCCCATCAATAAGGAACTTCTGGCACTGCTTACTCCGGTAGCATTCTGTCATGCTCTTGGACATGTTATGTCT
AATGTGTCGTTTGCAACTGTTGCTGTATCCTTCACTCATACCATCAAAGCTCTGGAGCCATTCTTCAGTGCTTCGGCTTC
TCAGTTTGTCTTGGGCCACCAGATCCCCGTCTCTCTGTGGTTATCACTGGCCCCTGTTGTCATTGGTGTATCGATGGCGT
CGTTGACTGAACTATCGTTCAATTGGACTGGCTTCATTAGTGCAATGATCTCAAATATTGCTTTCACTTACAGAAGTATC
TACTCAAAGAAAGCAATGACTGGAATGGACAGCACAAATGTATACGCGTATATTTCAATTATCGCCCTCCTCTTTTGCCT
CCCTCCAGCAATATTTATTGAAGGACCTCAACTACTGCAGTACGGTTTCCGCGATGCTATTGCTAAAGTAGGTCTTTATA
AGTTCTTATCCGACCTTTTGTGGATCGGGATGTTCTATCATCTGTATAACCAGATAGCTACTAACACCTTAGAGCGTGTA
GCGCCACTTACACATGCTGTTGGAAATGTGTTGAAGCGAGTGTTTGTGATTGGTTTCTCTATAGTAGTATTTGGAAACAA
GATATCGACTCAAACTGGGATTGGTACTGCAATAGCTATTGCTGGTGTTGCTATCTACTCGTTAATAAAGGCAAGGATGG
AAGAGCAAAAACGGAAGGCTTCTGCCCTTGCTCATGAACAATAGCGGGAGGACTAACAAAGACGAAGATGGTAAGAGTGA
ACACTAGAAGAGTATGAGGCAGCGCGGAGATGATCTGATAAATGCAGTAAGAATAGTTAATGTCGTCTCAGCTATGGCTT
TCAATTATGTTAAGTTTATTTGTTCTTCTG
GAATTTTCATTATGGCTTCAATCTCTAATTCCTTTCACTTTTCTCTAAAAAGATCAAATTTTTATTCTTCTTCATCCCAC
AAACTTATTAATAGAAATTTAACTAATTCAGTTTCACTCAAAAATTTGTCAATAATTGCAAATTCCAAAAACTTTGAATC
AATTAAGCCTAAATGCAGTCAATTATTGAAGCCAAGAAATAGTGTTGATGTTTTTGTTACAAAAGCAGTAGCTGCTGATG
CAGAGGGTCATGACATTGAAATTACTGATGGGTATGTTAAACCAACTAAAGGATTTGCTGAAAAATTTCCAGCTCTAGTT
ACTGGATTCTTTTTCTTTACATGGTACTTTCTGAATGTGATTTTCAACATACTCAACAAGAAAGTATACAACTATTTCCC
ATACCCATACTTCGTTTCAGTTGTACATCTCCTAGTTGGAGTAACCTATTGTCTTATTAGTTGGACCGTTGGTCTACCTA
AACGTGCGCCCATCAATAAGGAACTTCTGGCACTGCTTACTCCGGTAGCATTCTGTCATGCTCTTGGACATGTTATGTCT
AATGTGTCGTTTGCAACTGTTGCTGTATCCTTCACTCATACCATCAAAGCTCTGGAGCCATTCTTCAGTGCTTCGGCTTC
TCAGTTTGTCTTGGGCCACCAGATCCCCGTCTCTCTGTGGTTATCACTGGCCCCTGTTGTCATTGGTGTATCGATGGCGT
CGTTGACTGAACTATCGTTCAATTGGACTGGCTTCATTAGTGCAATGATCTCAAATATTGCTTTCACTTACAGAAGTATC
TACTCAAAGAAAGCAATGACTGGAATGGACAGCACAAATGTATACGCGTATATTTCAATTATCGCCCTCCTCTTTTGCCT
CCCTCCAGCAATATTTATTGAAGGACCTCAACTACTGCAGTACGGTTTCCGCGATGCTATTGCTAAAGTAGGTCTTTATA
AGTTCTTATCCGACCTTTTGTGGATCGGGATGTTCTATCATCTGTATAACCAGATAGCTACTAACACCTTAGAGCGTGTA
GCGCCACTTACACATGCTGTTGGAAATGTGTTGAAGCGAGTGTTTGTGATTGGTTTCTCTATAGTAGTATTTGGAAACAA
GATATCGACTCAAACTGGGATTGGTACTGCAATAGCTATTGCTGGTGTTGCTATCTACTCGTTAATAAAGGCAAGGATGG
AAGAGCAAAAACGGAAGGCTTCTGCCCTTGCTCATGAACAATAGCGGGAGGACTAACAAAGACGAAGATGGTAAGAGTGA
ACACTAGAAGAGTATGAGGCAGCGCGGAGATGATCTGATAAATGCAGTAAGAATAGTTAATGTCGTCTCAGCTATGGCTT
TCAATTATGTTAAGTTTATTTGTTCTTCTG
![]() ![]() | translated polypeptide sequence |
>Solyc01g010350.2.1 Glucose-6-phosphate/phosphate translocator (AHRD V1 **** Q7XY15_WHEAT); contains Interpro domain(s) IPR004696 Tpt phosphate/phosphoenolpyruvate translocator
MASISNSFHFSLKRSNFYSSSSHKLINRNLTNSVSLKNLSIIANSKNFESIKPKCSQLLKPRNSVDVFVTKAVAADAEGH
DIEITDGYVKPTKGFAEKFPALVTGFFFFTWYFLNVIFNILNKKVYNYFPYPYFVSVVHLLVGVTYCLISWTVGLPKRAP
INKELLALLTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFSASASQFVLGHQIPVSLWLSLAPVVIGVSMASLTE
LSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYISIIALLFCLPPAIFIEGPQLLQYGFRDAIAKVGLYKFLS
DLLWIGMFYHLYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAIAIAGVAIYSLIKARMEEQK
RKASALAHEQ*
MASISNSFHFSLKRSNFYSSSSHKLINRNLTNSVSLKNLSIIANSKNFESIKPKCSQLLKPRNSVDVFVTKAVAADAEGH
DIEITDGYVKPTKGFAEKFPALVTGFFFFTWYFLNVIFNILNKKVYNYFPYPYFVSVVHLLVGVTYCLISWTVGLPKRAP
INKELLALLTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFSASASQFVLGHQIPVSLWLSLAPVVIGVSMASLTE
LSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYISIIALLFCLPPAIFIEGPQLLQYGFRDAIAKVGLYKFLS
DLLWIGMFYHLYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAIAIAGVAIYSLIKARMEEQK
RKASALAHEQ*
![]() ![]() |
![]() ![]() | [Associate new unigene] |
Unigene ID:
none
GenBank accessions | None | [Associate new genbank sequence] |
Other genome matches | None |
![]() ![]() | [Associate publication] [Matching publications] |
Transcriptome profiling of cytokinin and auxin regulation in tomato root.
Journal of experimental botany (2013)
Show / hide abstract
Show / hide abstract
Tomato is a model and economically important crop plant with little information available about gene expression in roots. Currently, there have only been a few studies that examine hormonal responses in tomato roots and none at a genome-wide level. This study examined the transcriptome atlas of tomato root regions (root tip, lateral roots, and whole roots) and the transcriptional regulation of each root region in response to the plant hormones cytokinin and auxin using Illumina RNA sequencing. More than 165 million 1×54 base pair reads were mapped onto the Solanum lycopersicum reference genome and differential expression patterns in each root region in response to each hormone were assessed. Many novel cytokinin- and auxin-induced and -repressed genes were identified as significantly differentially expressed and the expression levels of several were confirmed by qPCR. A number of these regulated genes represent tomato orthologues of cytokinin- or auxin-regulated genes identified in other species, including CKXs, type-A RRs, Aux/IAAs, and ARFs. Additionally, the data confirm some of the hormone regulation studies for recently examined genes in tomato such as SlIAAs and SlGH3s. Moreover, genes expressed abundantly in each root region were identified which provide a spatial distribution of many classes of genes, including plant defence, secondary metabolite production, and general metabolism across the root. Overall this study presents the first global expression patterns of hormone-regulated transcripts in tomato roots, which will be functionally relevant for future studies directed towards tomato root growth and development.
Gupta, S. Shi, X. Lindquist, IE. Devitt, N. Mudge, J. Rashotte, AM.
Journal of experimental botany.
2013.
64(2).
695-704.
![]() ![]() | [Add ontology annotations] |
biological_process
|
plant_anatomy
|
![]() ![]() |
none found
Please wait, checking for comments about locus 9919
Your Lists
Public Lists
List Contents
List Validation Report: Failed
Elements not found:
Optional: Add Missing Accessions to A List
Mismatched case
Click the Adjust Case button to align the case in the list with what is in the database.
Multiple mismatched case
Items listed here have mulitple case mismatches and must be fixed manually. If accessions need to be merged, contact the database directly.
List elements matching a synonym
Multiple synonym matches
Fuzzy Search Results
Synonym Search Results
Available Seedlots
Your Datasets
Public Datasets
Dataset Contents
Dataset Validation Failed
Elements not found:
Your Calendar
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Having trouble viewing events on the calendar?
Are you associated with the breeding program you are interested in viewing?
Add New Event
Event Info
Attribute | Value |
---|---|
Project Name: | |
Start Date: | |
End Date: | |
Event Type: | |
Event Description: | |
Event Web URL: |
Edit Event
Login
Forgot Username
If you've forgotten your username, enter your email address below. An email will be sent with any account username(s) associated with your email address.
Reset Password
To reset your password, please enter your email address. A link will be sent to that address with a link that will enable you to reset your password.
Create New User
Working
