Clone hba-29m12

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Clone
Clone name
hba-29m12
LE_HBa0029M12
C03HBa0029M12
P029M12
Clone type
BAC
Contamination
none
Estimated length
106,385
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
Tomato FPC (AGI 2005)
ctg630 : [coherent], 7 members:
C03HBa0029M12, C03HBa0107H18, C03HBa0196B23, C03HBa0196C12, C03HBa0251O08, C03HBa0254C04, C03HBa0277F19
Marker matches - overgo what's this? 
Plausible matches
ProbeMapPlateWell
CT243Tomato-EXPEN 2000plate 4E10
 Additional Info
Overgo Plating Progress Report
Conflicted matches
None
  
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches) 
View on physical map chromosome 3
FISH mapNot on FISH map
FISH imagesNone
IL Mapping 
Assigned to project
China
IL-mapped to chromosome
3
IL-mapped to IL segment
-
IL mapping notes
-
Sequencing  
This clone is being sequenced by the Chromosome 3 Sequencing Project. (View projects)
Log in as a curator or sequencer to edit this clone's registry information.
Sequencing Project
Chromosome 3
HTGS phase
3 - finished
Sequencing Status
complete
Sequencing Organization
Chinese Academy of Sciences
Full Sequence
144,864 bp
C03HBa0029M12.1
AC235792.1 (GenBank) 		[View]
[Download fasta]
[Download full submission] (339.12 MB)
End Sequences
Warnings
none
FTP
Chromosome 3 Sequencing repository (FTP)
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Restriction Fragments
HindIII in vitro (23)
1589, 1846, 2030, 2119, 2201, 2222, 2404, 2763, 3004, 3307, 3307, 3484, 3675, 3770, 4650, 4650, 5265, 5463, 6259, 6259, 7061, 14003, 15054
HindIII in silico (36)
1161, 1196, 1229, 1330, 1370, 1425, 1483, 1501, 1583, 1594, 1807, 1992, 2089, 2180, 2233, 2419, 2776, 2779, 3017, 3021, 3272, 3329, 3350, 3511, 3695, 3790, 4540, 4601, 5000, 5110, 5987, 5995, 6001, 7048, 13620, 14376
Fragment Lengths Match Score
0.79
Annotations  
Browse
LE_HBa0029M12 has no browsable sequence annotations
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End Sequences

e.g. crystallin
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Map
Map position
 and  cM
Chromosome / Linkage Group
  
IL Bin Mapping
Assigned to project
Mapped to chr
Mapped to bin
  
 Verification

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