Clone hba-260j17

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Clone
Clone name
hba-260j17
LE_HBa0260J17
P260J17
Clone type
BAC
Contamination
none
Estimated length
65,251
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
Tomato FPC (AGI 2005)
ctg3960 : [coherent], 3 members:
LE_HBa0136D21, C09HBa0203J14, LE_HBa0260J17
Marker matches - overgo what's this? 
Plausible matches
ProbeMapPlateWell
TG9Tomato-EXPEN 2000plate 14G7
 Additional Info
Overgo Plating Progress Report
Conflicted matches
None
  
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches) 
View on physical map chromosome
FISH mapNot on FISH map
FISH imagesNone
IL MappingNone
Sequencing  
This clone is not assigned to any sequencing project.
Log in as a curator or sequencer to edit this clone's registry information.
Sequencing Project
none
HTGS phase
none
Sequencing Status
none
Sequencing Organization
not recorded
Full Sequence
Sequence not available.
End Sequences
None
Warnings
none
FTP
Sequencing repository (FTP)
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Restriction Fragments
HindIII in vitro (11)
2637, 3188, 3417, 3605, 3833, 4336, 5699, 6289, 6525, 10292, 15430
Annotations  
Browse
LE_HBa0260J17 has no browsable sequence annotations
Download
temporarily unavailable
User comments [Add comment] 
Posted by Marilyn West on 2008-11-12 15:56:33   
This BAC is listed as part of a 3 member contig. All 3 members have plausible matches to TG9, which is on tomato chromosome 9. I can't understand why this BAC and another one from the same contig, LE_HBa0136D21, show a physical map link to chromosome 1. Only one of the 3 BACS in the contig links to the physical map for chromosome 9, C09HBa0203J14. Help?
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End Sequences

e.g. crystallin
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Map
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IL Bin Mapping
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Mapped to chr
Mapped to bin
  
 Verification

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