Clone hba-26e6

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Clone
Clone name
hba-26e6
LE_HBa0026E06
C06HBa0026E06
P026E06
Clone type
BAC
Contamination
none
Estimated length
130,277
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
not present in Tomato FPC (AGI 2005)
Marker matches - overgo what's this? 
Plausible matches
ProbeMapPlateWell
P27Tomato-EXPEN 2000plate 14D3
 Additional Info
Overgo Plating Progress Report
Conflicted matches
None
  
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches) 
View on physical map chromosome 6
FISH mapNot on FISH map
FISH imagesNone
IL MappingNone
Sequencing  
This clone is being sequenced by the Chromosome 6 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 6
HTGS phase
3 - finished
Sequencing Status
complete
Sequencing Organization
The Centre for BioSystems Genomics
Full Sequence
157,334 bp
C06HBa0026E06.2
AC216645.2 (GenBank) 		[View]
[Download fasta]
[Download full submission] (113.12 MB)
End Sequences
Warnings
none
FTP
Chromosome 6 Sequencing repository (FTP)
Chromosome Assembly
View on AGP map chromosome 6
  
Restriction Fragments
HindIII in vitro (27)
1991, 2003, 2161, 2275, 2453, 2453, 2644, 2868, 3081, 3497, 3884, 4304, 4368, 4507, 4742, 4742, 5456, 5456, 5689, 6223, 6223, 6418, 6589, 7154, 8981, 9747, 10368
HindIII in silico (38)
1156, 1243, 1295, 1361, 1419, 1547, 1711, 1802, 1989, 2013, 2171, 2236, 2315, 2476, 2483, 2514, 2672, 2887, 3084, 3550, 3924, 4312, 4367, 4472, 4576, 4654, 4668, 5168, 5193, 5380, 6023, 6034, 6297, 6524, 7143, 8819, 9610, 10259
Fragment Lengths Match Score
0.82
Annotations  
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LE_HBa0026E06 has no browsable sequence annotations
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End Sequences

e.g. crystallin
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Map
Map position
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Chromosome / Linkage Group
  
IL Bin Mapping
Assigned to project
Mapped to chr
Mapped to bin
  
 Verification

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