Clone hba-107p11
 Clone and library
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Clone and library
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| Physical mapping
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| Fingerprint Contig Builds (FPC) |
- Tomato FPC (AGI 2005)
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ctg2450 : [coherent], 7 members:
LE_HBa0016P11, LE_HBa0070L20, C09HBa0107P11, LE_HBa0117A07, LE_HBa0238A11, LE_HBa0274P21, LE_HBa0324K08
| Marker matches - overgo what's this? |
Plausible matches
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Additional Info | ||||||||
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Conflicted matches
None
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| Marker matches - BLAST |
| Marker matches - manual |
| Physical map (from marker matches) |
| FISH map |
| FISH images |
| SC Spread ID | Images | Distance from centromere (percentage of arm length) | ||
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| 355-115 1 | Composite | Fluorescence | Phase | 63.0% |
| 355-128 1 | Composite | Fluorescence | Phase | 63.0% |
| 355-129 1 | Composite | Fluorescence | Phase | 64.4% |
| 355-130 1 | Composite | Fluorescence | Phase | 62.6% |
| 355-131 1 | Composite | Fluorescence | Phase | 64.0% |
| 355-136 1 | Composite | Fluorescence | Phase | 61.2% |
| 355-139 1 | Composite | Fluorescence | Phase | 65.8% |
| 355-144 1 | Composite | Fluorescence | Phase | 66.8% |
| 355-145 1 | Composite | Fluorescence | Phase | 64.9% |
| 355-149 1 | Composite | Fluorescence | Phase | 67.3% |
| 355-152 1 | Composite | Fluorescence | Phase | 64.8% |
| 355-23 1 | Composite | Fluorescence | Phase | 61.6% |
| 355-25 1 | Composite | Fluorescence | Phase | 62.3% |
| 355-26 1 | Composite | Fluorescence | Phase | 64.5% |
| 355-27 1 | Composite | Fluorescence | Phase | 64.1% |
| 355-28 1 | Composite | Fluorescence | Phase | 62.9% |
| 355-29 1 | Composite | Fluorescence | Phase | 63.7% |
| 355-30 1 | Composite | Fluorescence | Phase | 59.3% |
| 355-32 1 | Composite | Fluorescence | Phase | 63.9% |
| 355-33 1 | Composite | Fluorescence | Phase | 65.5% |
| 355-41 1 | Composite | Fluorescence | Phase | 62.0% |
| Mean±sd | 63.7%±1.9% | |||
Given an estimated length of 9.7µm for chromosome 9Q and the mean percentage above, this BAC is approximately 6.2µm±0.2µm from the chromosome centromere.
1Experiment conducted in the lab of Stephen Stack at Colorado State University.
| IL Mapping |
| Sequencing
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This clone is being sequenced by the Chromosome 9 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 9
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HTGS phase
none
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Sequencing Status
not_sequenced
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Sequencing Organization
not recorded
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Full Sequence
Sequence not available.
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End Sequences
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Warnings
none
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FTP | |
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Chromosome Assembly
this clone is not part of a chromosome assembly
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Restriction Fragments
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| Annotations
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Browse
LE_HBa0107P11 has no browsable sequence annotations
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Download
temporarily unavailable
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