Clone hba-168b11

Clone and library  
Clone
Clone name
hba-168b11
LE_HBa0168B11
C05HBa0168B11
P168B11
Clone type
BAC
Contamination
none
Estimated length
100,216
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
Tomato FPC (AGI 2005)
ctg4273 : [coherent], 2 members:
C05HBa0168B11, LE_HBa0198C19
Marker matches - overgo what's this? 
Plausible matches
ProbeMapPlateWell
T1541Tomato-EXPEN 2000plate 11F8
 Additional Info
Overgo Plating Progress Report
Conflicted matches
None
  
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches) 
View on physical map chromosome 5
FISH mapNot on FISH map
FISH imagesNone
IL MappingNone
Sequencing  
This clone is being sequenced by the Chromosome 5 Sequencing Project. (View projects)
Log in as a curator or sequencer to edit this clone's registry information.
Sequencing Project
Chromosome 5
HTGS phase
2 - fragmented, ordered
Sequencing Status
in_progress
Sequencing Organization
Indian Agricultural Research Institute
Full Sequence
102,019 bp
C05HBa0168B11.1
AC186291.2 (GenBank) 		[View]
[Download fasta]
[Download full submission] (1046.00 MB)
End Sequences
Warnings
  • sequence is not finished to HTGS3
 FTP
Chromosome 5 Sequencing repository (FTP)
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Restriction Fragments
HindIII in vitro (17)
1600, 1688, 2838, 2948, 3020, 3735, 3952, 4982, 5038, 6202, 6202, 7397, 8096, 9254, 9676, 10803, 12785
HindIII in silico (19)
1198, 1430, 1598, 1616, 1712, 2859, 2949, 3021, 3792, 4005, 4793, 4989, 6323, 7461, 7963, 9148, 9989, 10212, 12542
Fragment Lengths Match Score
0.92
Annotations  
Browse
LE_HBa0168B11 has no browsable sequence annotations
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End Sequences

e.g. crystallin
Overgo match to marker what's this?
Map
Map position
 and  cM
Chromosome / Linkage Group
  
IL Bin Mapping
Assigned to project
Mapped to chr
Mapped to bin
  
 Verification

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