Clone hba-257n18
Clone and library |
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Physical mapping |
Fingerprint Contig Builds (FPC) |
- Tomato FPC (AGI 2005)
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ctg4324 : [coherent], 2 members:
LE_HBa0106H01, C03HBa0257N18
Marker matches - overgo what's this? |
Plausible matches
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Additional Info | ||||||||
Conflicted matches
None
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Marker matches - BLAST |
Marker matches - manual |
Physical map (from marker matches) |
FISH map |
FISH images |
SC Spread ID | Images | Distance from centromere (percentage of arm length) | ||
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357-05 1 | Composite | Fluorescence | Phase | 76.0% |
357-09 1 | Composite | Fluorescence | Phase | 71.3% |
357-10 1 | Composite | Fluorescence | Phase | 74.4% |
357-11 1 | Composite | Fluorescence | Phase | 73.8% |
357-12 1 | Composite | Fluorescence | Phase | 70.8% |
357-13a 1 | Composite | Fluorescence | Phase | 72.9% |
357-13b 1 | Composite | Fluorescence | Phase | 72.3% |
357-13c 1 | Composite | Fluorescence | Phase | 72.6% |
357-14 1 | Composite | Fluorescence | Phase | 71.3% |
357-15 1 | Composite | Fluorescence | Phase | 71.8% |
357-16 1 | Composite | Fluorescence | Phase | 73.6% |
357-17 1 | Composite | Fluorescence | Phase | 71.2% |
357-18 1 | Composite | Fluorescence | Phase | 69.1% |
357-19 1 | Composite | Flourescence | Phase | 73.5% |
357-21 1 | Composite | Fluorescence | Phase | 70.9% |
357-23 1 | Composite | Fluorescence | Phase | 69.0% |
357-26 1 | Composite | Fluorescence | Phase | 73.3% |
357-28 1 | Composite | Fluorescence | Phase | 74.5% |
357-30 1 | Composite | Fluorescence | Phase | 73.5% |
357-31 1 | Composite | Fluorescence | Phase | 72.9% |
357-33 1 | Composite | Fluorescence | Phase | 74.8% |
Mean±sd | 72.5%±1.8% |
Given an estimated length of 4.8µm for chromosome 3P and the mean percentage above, this BAC is approximately 3.5µm±0.1µm from the chromosome centromere.
1Experiment conducted in the lab of Stephen Stack at Colorado State University.
IL Mapping |
Assigned to project
China
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IL-mapped to chromosome
3
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IL-mapped to IL segment
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IL mapping notes
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Sequencing |
This clone is being sequenced by the Chromosome 3 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 3
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HTGS phase
3 - finished
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Sequencing Status
complete
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Sequencing Organization
Uploaded by account 'jianfeng-ren'
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Full Sequence
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End Sequences
None
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Warnings
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FTP | ||
Chromosome Assembly
this clone is not part of a chromosome assembly
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Restriction Fragments
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Annotations |
Browse
LE_HBa0257N18 has no browsable sequence annotations
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Download
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