Clone Read LE_HBa0156K11_SP6_102260

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0156K11_SP6_102260
Primer
SP6
ID from Seq. Facility
LE_HBa_156_K11-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 844 raw
Sequence
>LE_HBa0156K11_SP6_102260 (raw untrimmed)
CCTCTCCCGACGACACCGCTCTTGCGGAACTGCCCCCTGCAACCATGCAATGCGTCGGGGAACGCGACAAGCTTCGGACTTCGAGTTCGCCGATGGTTTC
CTTGAAGGAGGGGATTTGGTGTATTTAGTAAAACGATTGACTATATAGCAAGAGATTCGACTTACTTACATCGCTAGTGAAACGGCTTCCTTTTCCACTA
TAACTGTGTGAAATTTTATCTGTTA
CTGTCACCATTTCCGGCCTGACGATGCATCGCATACTAGCGTCTCTTCTGATAAACTGTATACCGTTTGTGGGAT
GAGTGCCTCGAAAAACCTTAGATTCAGTATNAGGTCGGTGGGGATCCGCGTCGTTTCAGACTTCTCGTCTTACGTCTGCTGTCGGCAGACTCGACTAGAC
CATAGCCCATACACGCGAGGATTCTCATATGATAGACCCAGGACTGTCGCGCTCAACTAGATCGACAAGGCGGTCACACCGACGATGTTTTAGTTGGTGA
TTATCCATCCGTATTACGCTGGGATGACGAGCGCTGTCAAGGCTGGTATGGGCAGTGTACTCTTTAAAGACCCTGACTACTCTATGTGNTATGGCTCTCT
CAACCTGGAGTTATTACTAGNGCGGAAGAGGAGCATTGTTATGTATCATCTCTTACCAGAAAGAAGTACGTAACCTATTCATACAAGAATCCGTACATTA
AAGATGTCACATAGTGAAGGAATCCAAAGTCATAAGCGCATACGGCTCGTCCATCTCCATGACCAATCGCCGACCCACACTTGCTTTGAGCCTTCTCTGC
ACGGTGAGTGCTAACTATACCACATCCAACACTACCACAAGTTA
>LE_HBa0156K11_SP6_102260 (trimmed for quality and cloning vector)
CTG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.92142
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0156K11
Clone
Clone name
hba-156k11
LE_HBa0156K11
P156K11
Clone type
BAC
Contamination
none
Estimated length
116,527
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found