Clone Read LE_HBa0156N03_T7_102389

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0156N03_T7_102389
Primer
T7
ID from Seq. Facility
LE_HBa_156_N03-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
669 trimmed for vector and quality, 973 raw
Sequence
>LE_HBa0156N03_T7_102389 (trimmed for quality and cloning vector)
AGCTTAGGAAATCCTTATTGGATTAAAACAATTAGGGAAAATGTGGTATAATTATCTTAGCAAATATTTGCTAAAGGAAGGGTATAAGAATGATCTTGTT
TGTCCTTGTACTTTTATACAAAGGTCAAAATCTGAATTTGTAATAATATATGTTTATGTTGATGATTTGAACAACATTGGAACTCCTAAGGAGCTTTCAA
AAATCGTTGAGTGTTTGAAGAAAGAATTTGAAATGAAAGATCATGGTAGACAAAATTTTGTCTTGGCATTCAGATTGAACATTTGACAAATGAAATATTT
ATCCATTAATCAACACATACTGAAAAGGTTTTGAAGCAATTTTACATGGATAAAACACCGATTGAGTACTCCAATGGTTGTGAGGTCTCTCGATATAAAT
AGAGATCTATTTCGACCTCACGAAAAGGATGAAAAGGTTCTTAGTGATGAAATATCATATCTCAGTTCTATTGGTGCACTGATATACCTTAGCAACAATA
CCCGACTAGATATTTTTTTCGTAGTAAATATATTGGTGAGATTCAATTCATGTCCAACAAAAAGACATTGGAAAGGTGTTAAGCATATATTCAGATATCT
CCAAGGAACAATTGATATGAGATTATTTTATTCCTAATGCATACAAGTAAGGGTTGATCGGCTATGCTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.936364
Expected error %
0.940041
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
dbj|BAA97087.1| Score 216 E Value 3e-55 Identity 18.90% Align. Length 602bp (89.99%) Frame 3
copia-type pol polyprotein-like [Arabidopsis thaliana]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAF67380.1| Score 214 E Value 1e-54 Identity 18.90% Align. Length 602bp (89.99%) Frame 3
Hypothetical protein T15F17.l [Arabidopsis thaliana]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0156N03
Clone
Clone name
hba-156n3
LE_HBa0156N03
P156N03
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found