Clone Read LE_HBa0173K06_T7_105323

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0173K06_T7_105323
Primer
T7
ID from Seq. Facility
LE_HBa_173_K06-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
697 trimmed for vector and quality, 806 raw
Sequence
>LE_HBa0173K06_T7_105323 (raw untrimmed)
ACTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTCCCCATAACTCTTTTTAAAACCTTTGGGCATAGAGGAGTCCTACGACCTT
GTAGGACTCTCCTATACATTTTGCAAGGTGCAGCTCCTTTTAATAGATTATAGCTTGTGCCTGATCTCCCCATCTTGTTTAGGTAAAATCATGAATTCAA
ACTACAATAGGATGATCAAATTTAACCATCTTTTCATTTGAAAATTTGTGTGTATCTACTTCCATAAATTAACTGGTCAAAGTGAACCAAATAGATGTAT
GTCAGGTGTAAATTGTCTTCTTCATGTTTATGACGTTTTACTGTTTTTGGTATATTAAGGATCAAATTTCAGGATCACAGAGATTATCTTCTTCATTTTT
TTATAAAGAATAATAATCCATTTTAGTTTCTTTGTGAATGAAATACTTATTCTGTGCTGTTCATGTAATTTTTTTCAGGCTCTATTTATGCCATATGCTC
ACCAGAACACGACTCCGGAAGGATTACCTTCTCAGAGGATGAGATTAATGCTTGAAAAGTTGAATCGTTTTCAGCTGAATGATCGTTGCTTGGTTGGATC
TGGCGGAGGCTCTGTCGGGTTGGTATCACTTACTCATCACTTTTATGTTTAGCTACTTGGCTTGAGAAGGGAACATAAGTTGTATTCCTGTTAGATATAT
GCAATATGCTTGTTGTTTATCTAGCAGTGAATGTATTTTCTATTTCTGGCTTGTTTAAGCCTCTTTTGGATAAAAAAAATAATGATAAAGTTCACTCACA
TTGTTT
>LE_HBa0173K06_T7_105323 (trimmed for quality and cloning vector)
AGCTTTCCCCATAACTCTTTTTAAAACCTTTGGGCATAGAGGAGTCCTACGACCTTGTAGGACTCTCCTATACATTTTGCAAGGTGCAGCTCCTTTTAAT
AGATTATAGCTTGTGCCTGATCTCCCCATCTTGTTTAGGTAAAATCATGAATTCAAACTACAATAGGATGATCAAATTTAACCATCTTTTCATTTGAAAA
TTTGTGTGTATCTACTTCCATAAATTAACTGGTCAAAGTGAACCAAATAGATGTATGTCAGGTGTAAATTGTCTTCTTCATGTTTATGACGTTTTACTGT
TTTTGGTATATTAAGGATCAAATTTCAGGATCACAGAGATTATCTTCTTCATTTTTTTATAAAGAATAATAATCCATTTTAGTTTCTTTGTGAATGAAAT
ACTTATTCTGTGCTGTTCATGTAATTTTTTTCAGGCTCTATTTATGCCATATGCTCACCAGAACACGACTCCGGAAGGATTACCTTCTCAGAGGATGAGA
TTAATGCTTGAAAAGTTGAATCGTTTTCAGCTGAATGATCGTTGCTTGGTTGGATCTGGCGGAGGCTCTGTCGGGTTGGTATCACTTACTCATCACTTTT
ATGTTTAGCTACTTGGCTTGAGAAGGGAACATAAGTTGTATTCCTGTTAGATATATGCAATATGCTTGTTGTTTATCTAGCAGTGAATGTATTTTCT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.941565
Expected error %
0.683438
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At5g42320.1 Score 64 E Value 6e-11 Identity 23.70% Align. Length 113bp (16.21%) Frame 1
68418.m05150 zinc carboxypeptidase family protein contains Pfam domain, PF00246: Zinc carboxypeptidase
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0173K06
Clone
Clone name
hba-173k6
LE_HBa0173K06
P173K06
Clone type
BAC
Contamination
none
Estimated length
94,949
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found