Clone Read LE_HBa0189E17_SP6_106592

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0189E17_SP6_106592
Primer
SP6
ID from Seq. Facility
LE_HBa_189_E17-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
427 trimmed for vector and quality, 975 raw
Genbank Accession
DU092346
Sequence
>LE_HBa0189E17_SP6_106592 (raw untrimmed)
TCCCGGGTTTTCCTCAGCTTCCACAGATGAGATTCGTGAAGAGGTGGCTTAAATGAGAAATGATATTGTTTGGTGTTCAAACATTTCTATGGGGTGCGGA
AACACTAAATGCAGTTAATCATTTGGCCAAACAACCACTACCTGTTGATGTCTACTATAATGAAGAAGATTCTTATGCAATAAATTAGCAAATTGGGGGT
TTCCGACAGAATACCCAACCGAGAGGGTCTCTATGTTTGAGATGGAACCGCGAAACAATTTCAACCGGGGTAGCTATAAATAAAAAAATTTGATCGGAGT
GGGCCCTATTTTTCACTTCAAAATTGGCAAGTTGCTCCTAGAGATGGTGGAGGTAGTCTGGCGCGAGTTTACGATAAGTTGTAGAAGATGATGAGGATGT
TTAACGCTAGTTATGAGAATGCCAAAGCGGTGAGAGGTGATTTAGCAAATATTGAGCAAAAGGTGGATGCACATGCAATCTCAATAACGCACCTTTAGTT
GCAAATGGCACAATTGACTTCTACTAAGAACCCTCATCAACCAGTTACTCTTTCCTAGCAATACTGTTTAATATGGAAAAAATGATAGATTTTTGTATGT
CCGTCATTACCTCGAGGTGGTAAGCAAACTATATATTCCATCATGCTGCCTTTTCTACAAGATGATATGAGAACAGAAAATCGACGATTAGAAGCTAATG
TGTAGTGGTTTATAAATTACTAACATAACTTGTAAGAACTTATAAAAGACAGTCTGTTTTATTTTTAAACATTTCTCTTCTCCGTCGTATTCAGAAGATG
ATAACGGCAGACAAAAATGCGCGCTATAACAGAAGCTACAATTGATTGCTAATCAATCCTCATCTATAAACTTCAAGACCAAAGTATCCCGGTCTCCTTT
CTACTCACTATATGCCTACTATTGCTCGTATCTATGTGGTAACCACGAAAGTGGCAAAATATGTTTTGTGTGTCN
>LE_HBa0189E17_SP6_106592 (trimmed for quality and cloning vector)
GAGGTGGCTTAAATGAGAAATGATATTGTTTGGTGTTCAAACATTTCTATGGGGTGCGGAAACACTAAATGCAGTTAATCATTTGGCCAAACAACCACTA
CCTGTTGATGTCTACTATAATGAAGAAGATTCTTATGCAATAAATTAGCAAATTGGGGGTTTCCGACAGAATACCCAACCGAGAGGGTCTCTATGTTTGA
GATGGAACCGCGAAACAATTTCAACCGGGGTAGCTATAAATAAAAAAATTTGATCGGAGTGGGCCCTATTTTTCACTTCAAAATTGGCAAGTTGCTCCTA
GAGATGGTGGAGGTAGTCTGGCGCGAGTTTACGATAAGTTGTAGAAGATGATGAGGATGTTTAACGCTAGTTATGAGAATGCCAAAGCGGTGAGAGGTGA
TTTAGCAAATATTGAGCAAAAGGTGGA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.957742
Expected error %
0.537554
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0189E17
Clone
Clone name
hba-189e17
LE_HBa0189E17
C05HBa0189E17
P189E17
Clone type
BAC
Contamination
none
Estimated length
122,703
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found