Clone Read LE_HBa0188B22_T7_113363

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0188B22_T7_113363
Primer
T7
ID from Seq. Facility
LE_HBa_188_B22-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1215 raw
Sequence
>LE_HBa0188B22_T7_113363 (raw untrimmed)
TCCCTAGACTGGCGAGCGCCTTTATATTTTTCGACGTGGCTCGTGAATTGTCGCGTCGACGACGATTACTACACAGCGGTATGCTTACTAGTGCATGTAG
GCATGTACATGAAAAACTGAACCACCTTCTTAGAGAGATAAACATTCNACTCTTACGTTGATGCTTATGCAATGGTAGAAGGGTGCCCTCTTCATCGAGG
ATCGCTCGGACGTAGAACTGTTGTGAAACGTTCGTACGGAAATTCAAAATATATAGAAAATATGTGGGTATAAGAGGGTACATGTCATGATTTTATCTTC
CTATGCTAGAGACGGACANCACAGACTCTGCACCAACGGAGGAGTGGCTAACTGTGCCTCTATGTTACTTATCGCGCCCNCCGGGAGGTCAACGCGGGAA
CTACCATTGATTGTTTGCTCATGTACTTATGCTTCTCTGAGCTGTCGTACTACCGTGTGCCTTCTGATATTGACATTCTTCTGACGCAGGTTTAANGTTA
TGGGGTCACAGGTGTACACATTACCACATGGCACCTTGATGGCGATCTAGTCTATGTAATCCACTTCATATTACGAAATAAAAAATTGTCACGACGATAG
CTGATCTACACGCTAAAGTTTTCACTTGTGACTCCTAGACTACGGAGGAACTCCACATTTGGGTAGTGTTTACAGAACATCCACTGTTCGCTAGCCGAGC
TTAACGTGCTCCCTAGAGACAAGCAGACGTCCTCTAGGCTGGGAGGCAATGGATCACGAATTGACAAGGAAGAATGCTTATGAGGAAGGGAGGCTAACAA
GAATTGGCGGGATTGATTACACTACGGGGTTTTATGTGGTTGATTAATATTAGTGATACCCTAAATACGAAATTGTATGTGGTGTTTGATCCTGGAAGAT
CGGTACTGCTGATTTACTCCGACCACGTGTGGGCTGGGTTTTTGATCTGCTTGTCAAGTTCCTTACGAAGCCAGAATTTTCTATCGTGTTGAATTGTGTA
GATGTTACAACTATCGCCAGATTATCGCCGCTGGTACAAACGCGTAAAATTATTAGAGGGGTTTCTTCCGAAGTGACATGCATTCTGCCTTGTATGCCAT
TATGCCCGGGTTAATGGATTGGCGACCCGCCCTATGACCCTACTAAAATGTCTCTCAAAGGCTTATAAAATACAAGTTGATCCCCCTCCGTTGATGTGCA
GCTCGTTCGCTAATC
>LE_HBa0188B22_T7_113363 (trimmed for quality and cloning vector)
AT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
3.3129
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0188B22
Clone
Clone name
hba-188b22
LE_HBa0188B22
C12HBa0188B22
P188B22
Clone type
BAC
Contamination
none
Estimated length
110,707
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found