Clone Read LE_HBa0051F05_SP6_11384

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0051F05_SP6_11384
Primer
SP6
ID from Seq. Facility
LE_HBa_051_F05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
788 trimmed for vector and quality, 865 raw
Genbank Accession
Sequence
>LE_HBa0051F05_SP6_11384 (raw untrimmed)
AAAAAGGTTTCCNNCCCCTATTGATTATGGGGATCTTGCCTTACCAGATTGTGAAGCAGAGAAGCTCTGGAGAAAAAGCTGAGTCTGAAGATGCTATGTT
GACGGGATGTTGATTTGGGCTTTAAACAATGGGCCTAAAGCTAAAGGAAATGGGCCTAAAAAATTTCATGGCAAACAGATTTAAGGAAATAATATTTTAT
AGGGCAACTTTCACATATAGCAAACAAAAAAATCATATTTGTATAATATAGCAAACTTTGCATAATTGCGCTCCATAGCAAACATAAAAACTGTATAATT
CGCTATACATATAAAAGTGTATAATTCGCTGGCCTAAATTGTATAATTCGCTAGCCTAAATTGTATAATTCGCTGGCCTATTTCGCTGCAATTGTATAAT
TAGTTTTGCATACAGTTGAATCGAATTAAAATGTATCTATATTGCATAATTATAAGTGTATAGCAAGAAGATATATGTTTTTCTCGCTTTATACAAAAAC
AGAAACACAATATATACACTTCTGTTGTATAAAGCTAGAAAAAATTGTATTTCACTGCAATTGTATAATTCACAATTGTATAATTCTTTGGCCTTTTTCT
CTGCAATATTTAAAGTAAAATGTTTGTAAATTATATAATTAAGTGTATAACACGAAGATATACATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTA
TACAAAACAGAAATTATACACTTCTGTGTATAAAGCGAGAGAGGCGAGAATGGGAGAGTGGCGAGCGAGACTTCTGGGAGAGAGACGCCTGGCAAATTTT
TGCCAACGTTTGCTATGGAGCACAATTAAATCAAACCCCTAGCTATTCCATTTTAATTTTAGGTA
>LE_HBa0051F05_SP6_11384 (trimmed for quality and cloning vector)
TTGCCTTACCAGATTGTGAAGCAGAGAAGCTCTGGAGAAAAAGCTGAGTCTGAAGATGCTATGTTGACGGGATGTTGATTTGGGCTTTAAACAATGGGCC
TAAAGCTAAAGGAAATGGGCCTAAAAAATTTCATGGCAAACAGATTTAAGGAAATAATATTTTATAGGGCAACTTTCACATATAGCAAACAAAAAAATCA
TATTTGTATAATATAGCAAACTTTGCATAATTGCGCTCCATAGCAAACATAAAAACTGTATAATTCGCTATACATATAAAAGTGTATAATTCGCTGGCCT
AAATTGTATAATTCGCTAGCCTAAATTGTATAATTCGCTGGCCTATTTCGCTGCAATTGTATAATTAGTTTTGCATACAGTTGAATCGAATTAAAATGTA
TCTATATTGCATAATTATAAGTGTATAGCAAGAAGATATATGTTTTTCTCGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGC
TAGAAAAAATTGTATTTCACTGCAATTGTATAATTCACAATTGTATAATTCTTTGGCCTTTTTCTCTGCAATATTTAAAGTAAAATGTTTGTAAATTATA
TAATTAAGTGTATAACACGAAGATATACATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAATTATACACTTCTGTGTATAAAG
CGAGAGAGGCGAGAATGGGAGAGTGGCGAGCGAGACTTCTGGGAGAGAGACGCCTGGCAAATTTTTGCCAACGTTTGCTATGGAGCAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.935843
Expected error %
0.0806947
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0051F05
Clone
Clone name
hba-51f5
LE_HBa0051F05
P051F05
Clone type
BAC
Contamination
none
Estimated length
22,099
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found