Clone Read LE_HBa0026I24_T7_136740

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0026I24_T7_136740
Primer
T7
ID from Seq. Facility
LE_HBa_026_I24-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
795 trimmed for vector and quality, 890 raw
Sequence
>LE_HBa0026I24_T7_136740 (raw untrimmed)
GGGAAACTGGGTCCGGGGGGACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTACTAATTCCCAGTAAAACCCCTATAAAGGGTCCNNNAGACAANNNG
GANGCACCCACNACCCCTTTGGGGGGCGCCAACNGAANNCAGNNGCNNGNGNNNGNGCGCNNGNGNANGTGTGCGCGCGCGTNACTTCCATCAAAAGGAG
TGAGTTTGACGGCAGAGAATCTTTTGAGAGACCATAACAATGGAAAGAGAAAAAAATTGATTGATGATCATGTCAACAATGCAGAAAAGAAAGAACTAAT
TTCAAATTCTTCCCAGTGAACGAAGATCCTAGTTTAAACTAGCACTTCCTTCAAGGACTATCAAATGCTGATCATGAAGGAGTTATGCTATCAAGATAAC
TTAACCTGCTCACCCATCTTGTAAAGGAAATTCATGTTCCTCACCACATTGAAGGAAGAAGTTGCACAGGTTTTTTTTCAATTTAAATTACACAGTTTAT
GTTTGTCTATGCCTACGAAAGACCCGCTAATCAGAGGAGGAGTGTCTTCCTTGACAAATAGCAGATCACACAAAGTGCCAAACTGCAAAATTGTATTGCG
GGGCTCTGTAAATCTCAAGAGTTATATTCTTTTAACCTATCAACAACTAATTGATTCTCTGTTCTGATGGTTGACCAAGAAATATACGAGAAGGTACAGA
TATGCAGCATTTCGGAATAGGACAGGCACTCCCACCATTCTAGATTAGTCCCAAAAACAATGAACGTTTCTATATTTGAAAACAATTAACTTTGAATTTC
CCATTTTACCCTTAACGAAGTTTATATAATCACAAAAATGTTATGGATGTTTAAAACTATAAATTTCAAAAGTCTTTCTTTTTCTTAAAA
>LE_HBa0026I24_T7_136740 (trimmed for quality and cloning vector)
AGCTTTACTAATTCCCAGTAAAACCCCTATAAAGGGTCCNNNAGACAANNNGGANGCACCCACNACCCCTTTGGGGGGCGCCAACNGAANNCAGNNGCNN
GNGNNNGNGCGCNNGNGNANGTGTGCGCGCGCGTNACTTCCATCAAAAGGAGTGAGTTTGACGGCAGAGAATCTTTTGAGAGACCATAACAATGGAAAGA
GAAAAAAATTGATTGATGATCATGTCAACAATGCAGAAAAGAAAGAACTAATTTCAAATTCTTCCCAGTGAACGAAGATCCTAGTTTAAACTAGCACTTC
CTTCAAGGACTATCAAATGCTGATCATGAAGGAGTTATGCTATCAAGATAACTTAACCTGCTCACCCATCTTGTAAAGGAAATTCATGTTCCTCACCACA
TTGAAGGAAGAAGTTGCACAGGTTTTTTTTCAATTTAAATTACACAGTTTATGTTTGTCTATGCCTACGAAAGACCCGCTAATCAGAGGAGGAGTGTCTT
CCTTGACAAATAGCAGATCACACAAAGTGCCAAACTGCAAAATTGTATTGCGGGGCTCTGTAAATCTCAAGAGTTATATTCTTTTAACCTATCAACAACT
AATTGATTCTCTGTTCTGATGGTTGACCAAGAAATATACGAGAAGGTACAGATATGCAGCATTTCGGAATAGGACAGGCACTCCCACCATTCTAGATTAG
TCCCAAAAACAATGAACGTTTCTATATTTGAAAACAATTAACTTTGAATTTCCCATTTTACCCTTAACGAAGTTTATATAATCACAAAAATGTTA

This is probably not a useful sequence.

Problems:
  • High predicted error rate
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
1.02033
Expected error %
5.9969
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0026I24
Clone
Clone name
hba-26i24
LE_HBa0026I24
C09HBa0026I24
P026I24
Clone type
BAC
Contamination
none
Estimated length
111,059
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found