Clone Read LE_HBa0030G17_T7_138934

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0030G17_T7_138934
Primer
T7
ID from Seq. Facility
LE_HBa_030_G17-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
718 trimmed for vector and quality, 886 raw
Genbank Accession
Sequence
>LE_HBa0030G17_T7_138934 (trimmed for quality and cloning vector)
AGCTTTGACTAAGCCGATCCCACAATCATTTAAGTCCTTTCCAATCCGGGAGTATGCCGAGCCTGAATACTTTAGGGAAGGAATCTGTGACCTCTTCGAG
GAGATCAATGTTGTTGTCGAGGAGGAGGTCTAGCTAGCTGGTATTCGTGATGCTGAAGTAGGGGAGGTGATGCGGAACTGGACCTCCACGCCGATCCTAA
TACTCCGAACTCTTCGATAGAAAGGCGTTATTTCATGCATTAATGTCAGTGGTTGTCCAGAGGAGGCCCGAGACCTACCATTTTTGCATTTTTCCTATCT
GTTCAAATTTTCAAATTTTCGTTGTGATGTTCAAAAGGCAACATGGCCCCATGCTATGGCCAAAGTTTGCATTGTTTTATTTATGAAAGCCTCTTTATTT
TAACTTTATTTAATTAGTTGTTTGTTATGCCTTAATTTCCTAGTTTTATCTATTTATGATATTAGTAATATAAGTTACAGACCTGCCAATGTCATGTCGT
GTCACGAGCTAAATGAACAAAGTGAGGTAGGTGAGGACAAGGTTGACGATTATGATGAAGAAAGTGGGGAACTAGACTATGTCGCCGAGGAATTCCGGCA
GTTTGAGAATCAGCATAAGTCCAATCTAGAGGAAACAAAAATGTTGAATTTGGGAAATTCAGAATGTGTTAAAGAGGTTAAGATTAACACCCACCTTAAT
TGAAGCTCCAAAGGAGGG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.981161
Expected error %
0.9697
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAU89777.1| Score 74 E Value 5e-12 Identity 16.90% Align. Length 188bp (26.18%) Frame 3
gag-pol polyprotein-like [Solanum tuberosum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0030G17
Clone
Clone name
hba-30g17
LE_HBa0030G17
P030G17
Clone type
BAC
Contamination
none
Estimated length
858,829
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found