Clone Read LE_HBa0070O17_T7_15681

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0070O17_T7_15681
Primer
T7
ID from Seq. Facility
LE_HBa_070_O17-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
668 trimmed for vector and quality, 715 raw
Genbank Accession
DU033776
Sequence
>LE_HBa0070O17_T7_15681 (raw untrimmed)
ACACGGGACCCGGGGTACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGCTCAGTTATTTTCTCCCAATCCCCTTAAAATATTTTGTTGCTCATCTTGA
CATAAAATAATTTTACCCTAGAAGGATCAGAAATAACACATTCACGATTCTTAAAATGCAGTGAACAATTATTTTCAAGCATTTACCCAACTCACAACAA
ATTCCGATTCATATCAGGTGTGTACAAAACATCAAAAATAGTTAAATATTTGATATTGTTGAGATAGACAGTGTACCTCTACTATTGACTTCTACCGCCT
CACCGTTTACTACTTTTACTTTAGATTTGTAAGTACGATCAAGGAATTTGAACATTTCAACAAAATTGCACAAGTGTTGTATGTAACCACTATGAAGAAG
CCATGAATCATAGGATTTTGAAAGAGACTACAAAGAGTTGCTCCGTATGTGGATCTTAAGAATCTGCTACTTGTGCTTGCAAAGCATTAGAGGCCATTGC
TCTTGATTTGTAGACCTTGGATGACACATATAACATCAACTCTCCACCAACAGTACTTCTCCAGATGTGTATTTCCCTTGCAATGTTTGCACGGAGGGAA
GTTCTGCTTCACATCTCCACTATTGTTTCGTTCATCATGCTTGCCCTTGATCTTTTGATTGAACTATTGCTTTCCTTTTTTGCTTTTGTACAGAGAAACC
TCATTCAGTGAACTT
>LE_HBa0070O17_T7_15681 (trimmed for quality and cloning vector)
AGCTTGCTCAGTTATTTTCTCCCAATCCCCTTAAAATATTTTGTTGCTCATCTTGACATAAAATAATTTTACCCTAGAAGGATCAGAAATAACACATTCA
CGATTCTTAAAATGCAGTGAACAATTATTTTCAAGCATTTACCCAACTCACAACAAATTCCGATTCATATCAGGTGTGTACAAAACATCAAAAATAGTTA
AATATTTGATATTGTTGAGATAGACAGTGTACCTCTACTATTGACTTCTACCGCCTCACCGTTTACTACTTTTACTTTAGATTTGTAAGTACGATCAAGG
AATTTGAACATTTCAACAAAATTGCACAAGTGTTGTATGTAACCACTATGAAGAAGCCATGAATCATAGGATTTTGAAAGAGACTACAAAGAGTTGCTCC
GTATGTGGATCTTAAGAATCTGCTACTTGTGCTTGCAAAGCATTAGAGGCCATTGCTCTTGATTTGTAGACCTTGGATGACACATATAACATCAACTCTC
CACCAACAGTACTTCTCCAGATGTGTATTTCCCTTGCAATGTTTGCACGGAGGGAAGTTCTGCTTCACATCTCCACTATTGTTTCGTTCATCATGCTTGC
CCTTGATCTTTTGATTGAACTATTGCTTTCCTTTTTTGCTTTTGTACAGAGAAACCTCATTCAGTGAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.955216
Expected error %
0.272407
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38797.1| Score 121 E Value 5e-47 Identity 50.90% Align. Length 633bp (94.76%) Frame 2
putative polyprotein [Solanum demissum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38786.1| Score 56 E Value 2e-13 Identity 44.10% Align. Length 358bp (53.59%) Frame 2
putative gag-pol polyprotein [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0070O17
Clone
Clone name
hba-70o17
LE_HBa0070O17
C02HBa0070O17
P070O17
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found