Clone Read LE_HBa0001D17_SP6_177

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0001D17_SP6_177
Primer
SP6
ID from Seq. Facility
Le-HBa001_D17-SP6.ab1
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
664 trimmed for vector and quality, 1345 raw
Genbank Accession
Sequence
>LE_HBa0001D17_SP6_177 (raw untrimmed)
CCATATTGGAAGATTGGTTGTTCGCCTTATCAATAAGGATGGGAGAGCCGTTACTTCATATTAGATTTAGATTATTGTTATCCTTTGCCTTATTTAAGAT
GTTTTTTTAATGCCAGTACAATGATATATCTTGAGATAGTTACATAGTGGTGCCTGTTAGTGTGGTTTGGCGAAGTTGTTTCTCATTGATACCAATAAGG
ATGATAAAACTATCATTTACTGTTAGATTTAGGTTATTGTTACTGGTTCTCATTAGAGATACAGTATGGAATAGCAGCGGCTCAAACAGAGAGACAGAGG
AAGCATGAGCTTTTAAAAGCTAAAACTTCCTAGCATAATGCTAATGAGTTGGCTGTATGTGAACTCATAAGTCATAGCAAAACTATTGGCGTCTATTTGA
AATATTCCCCTTTTCTCATTCTTTTAACTTTACTAATTTGATTATATTTAAAGATAGTTTTAGTTCTTCTCAGTTGGAGATAACTAAATATACTTTGGAA
CAACGGTAGATTGTGTGATTAAAAAATAGCTGGTTGAAGAGAGGTAACACCAGCACTAAAGCATGAGAAGTGATGTTATTCTCTATTAATTGCAATTCTT
GTGGTTTGTTACTTTTCCATTTCGTGAAAAGGCTCTAACTTCAGAATTGTCTACATCTCTTTATAATTAACTGTCTCCTTTTTTTTTTACTGGTTTTAGC
TTGAGGTTGTTCGAAAACTATTTGTTGAAAACTGGAATAGTTCACATCGCTTGGAAGCTCTCACGTATGCAGCTGTCTATTCTAAGGTTTCGTAATTTTT
TTAGAAGACTTGCTTTGATTCATTTCTATTCCTAACTGGATAATACTCTTGGGGTGCAGTGGAAAAAAATACGGGCAAATTTCCTTGCCTTGGAGATGGG
GGTCACCCTCGACCAAATAAAAATTGCAAAAAATTTTCCAGGCTTTTTTTTTTGTGAAGAAAAAAAAAATTTTGAACAAGAAAAACAACTCCCCTTAGGG
GGTTTCCACCGTTTAAATTCCACATCATTAACCCATGATTTTTAATTTTGGTTTATGCCTTTTTAATTTCTGAAACAATATTGTGTTTCTCTTTAAAAAA
ATTAAATGTTAATTCTACATAAACTTGGTCCCATTTTATTCTTCTACAAATTTTAAAATTCACTATTTTTGAAAATGGGGGTGAAACATTTGTCGTAACA
ACAGGATAGTCTATTACCAAACACCGGGATATTCCTACCTTTGGACACTCGGGGGGGGACTCCCCCTCCTTATTTTGACCTCCGGCAGATTCCAGTAATA
TGGCGATTTTCGTTTTCTTTTTTCCATCACGCGATAATAATATTT
>LE_HBa0001D17_SP6_177 (trimmed for quality and cloning vector)
TCAATAAGGATGGGAGAGCCGTTACTTCATATTAGATTTAGATTATTGTTATCCTTTGCCTTATTTAAGATGTTTTTTTAATGCCAGTACAATGATATAT
CTTGAGATAGTTACATAGTGGTGCCTGTTAGTGTGGTTTGGCGAAGTTGTTTCTCATTGATACCAATAAGGATGATAAAACTATCATTTACTGTTAGATT
TAGGTTATTGTTACTGGTTCTCATTAGAGATACAGTATGGAATAGCAGCGGCTCAAACAGAGAGACAGAGGAAGCATGAGCTTTTAAAAGCTAAAACTTC
CTAGCATAATGCTAATGAGTTGGCTGTATGTGAACTCATAAGTCATAGCAAAACTATTGGCGTCTATTTGAAATATTCCCCTTTTCTCATTCTTTTAACT
TTACTAATTTGATTATATTTAAAGATAGTTTTAGTTCTTCTCAGTTGGAGATAACTAAATATACTTTGGAACAACGGTAGATTGTGTGATTAAAAAATAG
CTGGTTGAAGAGAGGTAACACCAGCACTAAAGCATGAGAAGTGATGTTATTCTCTATTAATTGCAATTCTTGTGGTTTGTTACTTTTCCATTTCGTGAAA
AGGCTCTAACTTCAGAATTGTCTACATCTCTTTATAATTAACTGTCTCCTTTTTTTTTTACTGG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.937975
Expected error %
0.0223117
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0001D17
Clone
Clone name
hba-1d17
LE_HBa0001D17
P001D17
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
3 sequencing reads found