Clone Read LE_HBa0161E19_T7_201434

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0161E19_T7_201434
Primer
T7
ID from Seq. Facility
LE_HBa_161_E19-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
8 trimmed for vector and quality, 610 raw
Sequence
>LE_HBa0161E19_T7_201434 (raw untrimmed)
AAGGAGGATAACATGAAGAAGGTGGGAGAAAGGAGTGACTAGCCACAGCTCAAACAAAGATAAGAGGTGTCAGTTCGGTGAAAAGCACGAAAGCGGCAAA
TGCGCCCCTCCTTTAAAGAGGGCCTCTCCGTTCTTCTCGCAAGTCAATACNTGTGAGTCATACCCCCCCTTGTGAGGACGGCAACGCTAATGCGTATTTG
TTTATAATGTTGTTGATTTGAGTTTTTTTTTGTTACTTGCTCTCAGCGAGACTGTCTCTCTTCCTGCTGGCGTGTTGTACCCCTGATCACTAATTTATTT
TTTTTTATGAATCTTTATATAACTTCAACTCTAGCAAATGGACAATAACGATCGTGTTTTTTTTGATTATTTCATTTTGTTTTCTTATCCATCTCCACTC
ACCACGACGGGCACGAGCATAACATATTAATACTGGCTCGAGCGCTAATGAAACTGTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTGTTGTTTTCTTTT
TTTTTTTAGATCGGATGTACCTGTACGTTTCATTGCTATTCGCTGGACTGGACGGATGAAAGGTTCATTCGTTTTTTTATTTTTTCTTTAGCTTTTATTT
GACTTTATTC
>LE_HBa0161E19_T7_201434 (trimmed for quality and cloning vector)
TTTTTTTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.722214
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0161E19
Clone
Clone name
hba-161e19
LE_HBa0161E19
C12HBa0161E19
P161E19
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found