Clone Read LE_HBa0171F13_T7_202105

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0171F13_T7_202105
Primer
T7
ID from Seq. Facility
LE_HBa_171_F13-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
17 trimmed for vector and quality, 926 raw
Sequence
>LE_HBa0171F13_T7_202105 (raw untrimmed)
TTCTCCCGGGGGGGGATCCTCTATTAGTCAACCTTGCAGGCATGCAAGCTTTAGCCCAGTCACCATTGTCTTGCCAATTCTAATAACAAAAGCATGTAGC
CCTTAGTTTGGGGCAACCCATATTGCGGTCTCACCCCACGAACTTTCACTCATACTTGTTTTCTCCTTTATTTTTGTTTTTTTACCACCCGTGACCGCCC
CCCTTCCTAATATTTTATCATAATGGGGGCACCTACTCTAACTTGTTTTGTCTTAATATTCTGAAATATCCTTCCTATTCCTCTATCTCGAACCAACTAG
ATAACCAGTCACAACAGGGCAACAGCAGATACCTTTCACCAGTTCCCTTGTGGTTGCAAGTATAACTGTTATCTATTCTTCTCTGAGTTATCATTTTTAG
ATATTATATTATTTCATTACTCATATTTGCACCTCTTCGACTATCTCTTTTTTTTTTATACTATTTTATATTTTATTCTGTTGTTTATATCTATACATTA
TTCCCCTACTGTAGTTTAATGCCATTCCTACTAATACTCTTTAATGTATTGCAGTTCGACTATTATTTGTTTTCTTTTGGTATTTCTATTATATTGTGGC
TTATTTTTCTTCATTTCGCTTTATTTTATCACGATTTATGCCTTTCTCTATTATATCATACTCTTGCTCGCATTATTCATTATCCTTTTCATTATCCCAT
ATCTTTATCTGCGCATCATATCTCGGTATCTCTGTTCTGCTCGCTAATGCCGGGTGGTGTTGACAAGTTCTAATTGTCACGCATGTTCCACATATACTCA
CTATCTGCGTATGTAACAATTCTCTTTATAATACTTATTTACCCTATAATTTTATTCATTTTTTTGCTATCTTTATTCCCTCCACCTTGTATCGCCTGTT
CGCGTGTCCGTCGGGATCTTTCGTTA
>LE_HBa0171F13_T7_202105 (trimmed for quality and cloning vector)
CCCAGTCACCATTGTCT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.387604
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0171F13
Clone
Clone name
hba-171f13
LE_HBa0171F13
P171F13
Clone type
BAC
Contamination
none
Estimated length
120,783
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found