Clone Read LE_HBa0174A03_T7_202362

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0174A03_T7_202362
Primer
T7
ID from Seq. Facility
LE_HBa_174_A03-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
624 trimmed for vector and quality, 800 raw
Sequence
>LE_HBa0174A03_T7_202362 (raw untrimmed)
ACCTGGTTCCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGGAGGCATAGACAAGTGATGATCTTTTTTCACCGGAGGAGGCCCGTTATG
GCAATTTACATAGCCATTTTTAGATACTCATGCATGAAGGAAGAATCTTGTATCAGTGATCGTTGAGAAGAAGTAAGCGTCCTCGAAGAAGAGGTTCATG
GAGTAAAGTCCATACTTCGCGAATTTGAAATTGAGAGCTCTAGCAAAACAATTTCTTAAAGAAAATGAAGTGCCTCTTAAAGAAAAAGATATTGATACCT
CAGAGGATGAAAAATGCTCTGATCAATACAGCCGCTTCATCACCGGGAGGTATTGATGACGCAGGGATTAGTAAGATTACTAAAGTGAGACCTCAAAGTT
CTCATATTATGATCAAACCAATTGTTAATTCTAATTTTGTACTTAACAAAATTGCTTTGTTAGACAGTGGTGCAGATCGTAATTGCATTGTTGAAGGACT
TATCCCTACCAAGTACCTCCAAAAGGGAACTACTAAATTATATAGCGCGACTGGTGAGCGTATCTTTATAAATTGATAAGGTTTCTAATGCTCATATCTG
CAATGATGGTATCTGCCTTTCTAATGATTTTGTTATGACAAAAAACATTAAGGAGGAAATTATTTTGGGTATACCATTTATTACCCAAATTTAAACCTTA
TATTTTAGATTTTGATTTAATCAAAACAAAAATTTTACGAAAGCCTATTTTCTTTTCCTTTTATCAAGACAATTTCCCTTTGAACGAAAGTAAATTTTTT
>LE_HBa0174A03_T7_202362 (trimmed for quality and cloning vector)
AGCTTGGAGGCATAGACAAGTGATGATCTTTTTTCACCGGAGGAGGCCCGTTATGGCAATTTACATAGCCATTTTTAGATACTCATGCATGAAGGAAGAA
TCTTGTATCAGTGATCGTTGAGAAGAAGTAAGCGTCCTCGAAGAAGAGGTTCATGGAGTAAAGTCCATACTTCGCGAATTTGAAATTGAGAGCTCTAGCA
AAACAATTTCTTAAAGAAAATGAAGTGCCTCTTAAAGAAAAAGATATTGATACCTCAGAGGATGAAAAATGCTCTGATCAATACAGCCGCTTCATCACCG
GGAGGTATTGATGACGCAGGGATTAGTAAGATTACTAAAGTGAGACCTCAAAGTTCTCATATTATGATCAAACCAATTGTTAATTCTAATTTTGTACTTA
ACAAAATTGCTTTGTTAGACAGTGGTGCAGATCGTAATTGCATTGTTGAAGGACTTATCCCTACCAAGTACCTCCAAAAGGGAACTACTAAATTATATAG
CGCGACTGGTGAGCGTATCTTTATAAATTGATAAGGTTTCTAATGCTCATATCTGCAATGATGGTATCTGCCTTTCTAATGATTTTGTTATGACAAAAAA
CATTAAGGAGGAAATTATTTTGGG

This is probably not a useful sequence.

Problems:
  • High predicted error rate
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.962714
Expected error %
4.34187
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0174A03
Clone
Clone name
hba-174a3
LE_HBa0174A03
P174A03
Clone type
BAC
Contamination
none
Estimated length
88,854
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found