Clone Read LE_HBa0195I23_T7_259390

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0195I23_T7_259390
Primer
T7
ID from Seq. Facility
LE_HBa_195_I23-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
89 trimmed for vector and quality, 1048 raw
Sequence
>LE_HBa0195I23_T7_259390 (raw untrimmed)
NGCGAAACCCCNNACGGATGACGGAATATTGACTTAGACTACTGAAAAAAAGTTTCTCTTTAAGAAAAGGCTTTAATAAATTTTAAATATAGTAATTACA
AAGGTAGAAACAAAATCAAATCTTGTCTGGCCCATCCAGGGCCAGAGAGCATCGCAGACATCGATCTCGCTCCATGTCACGGGAACCCAAGATTTTAAGA
GATCCAAAGCTCGGGAGAAACGCCATCGCCACAGGGCCCGCTCCAACAGCCGTAGCCGCAGCCGTAACCACCACAAAAGACGGCCCGGTGCTTTACAACG
AGCGGAGAACGATCCTACAAGAGGGATTGAGGCGGCGCACAAAAGAAGGAGACCTGCCCTCCTCTTAGACAAATAGGCGGGATAACCAAGGTGGCCCATG
TGGACCGACACGAGTACCAACGGTCGCAACAATTAGGAGCCGGAAAGAACCCACCCAAGGATGGGGGGGGAGCAACCGGAGGTTTTTTTTTTTTCCAGGC
CCCCCGCACCCGGAATCCCCGCACCACGGCCGCCAAAAAAAAGAGGGGGGGGGGCGGAGACGACCAGCCTCGCCGACAACCCCACTCCATCCGCGGGCAC
CCAGGGCACCCCGCCGACACGAAGCCCACGGAGGGACCGCCCGGCCAGCGTTCGAACCCCGACCAGGACTGCTCGAGCGCCACAAGCAGGATCGAACACC
GGCGCGAGCCCGCCTACATCCCACGCCCACTGCACTAAAGCGCACCGGAAAACAGCGACCGGGCCGGTCCTCCGGGCGGAAACCAGCCCCACCCCCGCAA
CCCACGCGGGCACCCACATCACGGCCCACACCACCAGGAACAGACCCCCGCCACCCCGCCCAGCCACGCCAAGAACTCGCGGCGCCGCAGGCAACGCCGG
GAGGACGCGCCCGAGCAGCAGGCAAGACGAACGGTCGAAAGGCGCGCAACGCATGAACCACACGCACCCGGGAGGAAGGGTCCGAACGCACCAGGAGACG
CGCAGCCCGATACGGGCACAGAGGCGAAGCACGAACCCAGCACGCGAG
>LE_HBa0195I23_T7_259390 (trimmed for quality and cloning vector)
TTACAAAGGTAGAAACAAAATCAAATCTTGTCTGGCCCATCCAGGGCCAGAGAGCATCGCAGACATCGATCTCGCTCCATGTCACGGGA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.910936
Expected error %
1.62127
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0195I23
Clone
Clone name
hba-195i23
LE_HBa0195I23
C12HBa0195I23
P195I23
Clone type
BAC
Contamination
none
Estimated length
94,909
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found