Clone Read LE_HBa0165F17_SP6_262557

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0165F17_SP6_262557
Primer
SP6
ID from Seq. Facility
LE_HBa_165_F17-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
535 trimmed for vector and quality, 949 raw
Sequence
>LE_HBa0165F17_SP6_262557 (raw untrimmed)
ATATTTATCCTTTTTCTCCATTAATCTATTTTTAATAAATTATTTTACAAAATTTACGTGCCTTTTAGTTTTAGAATAATTAATGCAGTGGGCAATGTTT
CACAAATACTTCATTTTTTCTTATTGACTTTAAAACATGACAATAAAATGATAATAAAAAAAAACGTATAAATTTGATTAGATTTTCCAATACTTTTATG
TTCCCATAAATTGACTTATATCAGTTTTTAATTTTGGGGGACCTTCATTAGAAAAAATAAAATTTCAATTTTTCTCCTAAAACTTATGGCGAAACGAAAG
CTATTACTGTTCGAGATATTAATGAGGGGACAAGGATTAGTAGCATAGAAATCATTGTCCAATGTTTGGTTACTCTAATACTATATAAGCAATTTGGAGA
TTGATTTGAAGTCCTTGTCTAATGTTTGAAATTTGGACTCACATGTCAGATAATTTGTCATTATTTAAGTCCTAATCAAGTTTCAATAAATGTAATTCGA
TACTTTTAGTGGCAAAATAGTTAACTCCATTCACTTTAATTTTTATTTTAAGTGGATTTTGAAGTTAACAAATTAGAACAGGACGTGTCATGTTTTGATT
TATTTATTATTGTCCATTAAAGAACTAACCCAATTAGGCAAGAGGGACCCCTTTATTGATATTGACTGAAATGTCAATTAACATTTAGTATGCCTTTTGC
CCATTGGTTAAATAACTTTCAAATCCAATCTTCTGGACCTTTCCATAAAATTGATTTTTTATTAAATATTCTAAAAATTTAATACTAAAATTAAAATTTT
ATTTTACTTGAAAAAAATAAATTTCAAATTTTTTTTCCCTTTTTCTGCAATTTTGGGTTAAAATCCAGTGGGGCCTAATAATTTAAAAGGACTCATTTAA
TCTATCTAAAGGAAAACTTAATTTTTACCGGCCCGCTTTTCTTCTTGTA
>LE_HBa0165F17_SP6_262557 (trimmed for quality and cloning vector)
ATCCTTTTTCTCCATTAATCTATTTTTAATAAATTATTTTACAAAATTTACGTGCCTTTTAGTTTTAGAATAATTAATGCAGTGGGCAATGTTTCACAAA
TACTTCATTTTTTCTTATTGACTTTAAAACATGACAATAAAATGATAATAAAAAAAAACGTATAAATTTGATTAGATTTTCCAATACTTTTATGTTCCCA
TAAATTGACTTATATCAGTTTTTAATTTTGGGGGACCTTCATTAGAAAAAATAAAATTTCAATTTTTCTCCTAAAACTTATGGCGAAACGAAAGCTATTA
CTGTTCGAGATATTAATGAGGGGACAAGGATTAGTAGCATAGAAATCATTGTCCAATGTTTGGTTACTCTAATACTATATAAGCAATTTGGAGATTGATT
TGAAGTCCTTGTCTAATGTTTGAAATTTGGACTCACATGTCAGATAATTTGTCATTATTTAAGTCCTAATCAAGTTTCAATAAATGTAATTCGATACTTT
TAGTGGCAAAATAGTTAACTCCATTCACTTTAATT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.907252
Expected error %
0.226888
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0165F17
Clone
Clone name
hba-165f17
LE_HBa0165F17
C02HBa0165F17
P165F17
Clone type
BAC
Contamination
none
Estimated length
117,027
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found