Clone Read LE_HBa0103A09_T7_32657

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0103A09_T7_32657
Primer
T7
ID from Seq. Facility
LE_HBa_103_A09-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1390 raw
Sequence
>LE_HBa0103A09_T7_32657 (raw untrimmed)
TAATCGTATGTGCATAAGCAGACCCTCGAGGTGCGATGGAGTTGCTGGTATCTCAGATCTCTCCACTCGACNCAGAACTAGGACGGGAAGCCCTCGTCCG
CCGGCTATGCTATGTGACACTATGTACCGCCCTCCCGTGTTGAGATAGCGACGTACATTCCTCTCAATCGCTCGCGGAGCTACGTATACAGCCCGACAGG
GACTCCCACTTTATTGCACGCGACTACGAACGACTAGGAAGTGTAAGGAGAGAGATGAAAGTATTGCAGGTAAGAGATAAGCCACTTAGTAGACTACCAC
ACGAGAGAGAGAGCGATCGGGCTAGCAGTGTATATATTGTCAACGACTATCGATCTGACGTTGTAACCATATGTATAATGTAGAATAGAGTAGAGCGAGT
TGCGACGGATATCCCGTACTATCCACTTAAGATATGTGCATGACAGGTTGGATAAGATATTCACTAATACAGGGATGTGCTATGTAGCTGGGCGTAATTC
TCGAAGGGAGACATGACACGTCGTCGATAATTATCACCATCTACTATTACACACCTTATATATATTAGATATACAATGAACATATATTAACACACATAAT
GCACATACTATACGACGTCAGTATTGTNACTGAACACATAGGACACCTCTATATGATCTTTAACGTTAAGTATGTAGGGATGACGCTGCGAGCTCGATGA
TTACGCATCTAGACATCTATCGTGGTCGTCTCCCTTGACTACTAGTGATTTAGGCGTTGAATTCGTCAGCGTTCTTACTCTATCGTACTTCTACGATCAC
TGGTCTACATGTTGACTCTCCAATCTACGCTGGATTGTCTTCTAATGTGTAGTTGCCGTATCTGTATTCACTATAATCGCTCCTCTTACTCGCCCTATGT
TCTTTGCCTAGTGTCTCTGCTATTGCAGTCTAGATCTGCACTATTTATGAAACGTGCCTATGTACAACCTCCTGGATAACAAGGCGAACATTATGAGCCT
GCAAGCGATTATCGTACTATTCTTCTCTCATATTCTGCTTCTACTAACGCTGACTTTTACTCTTCATTGCGCCTGTAGTTGTGGCGGTGCTTTACTTTTG
TATTTCTGAGTGCATTATGCTCATTGTGATATCGTCTGACAGATCATCAGACACACTCATGTAGTGGCGACGCGATATGGCAAGCAGAGAATGGATAAAG
ACAATTTCCAGCGCATCCATCTAGTGATGGTAGTCCTGGGTANTATATGGTGCTAGAGGCTGTAACACCTACACCCTCCTCGGTACCATTATTGATTAGT
ATTACACAGANACTACTCGCGGTGTTCTTCGCTATCATCTCCCTTGACACCATACTCCCTATCACAGATAACTACTAACAAATTAACTCA
>LE_HBa0103A09_T7_32657 (trimmed for quality and cloning vector)
T

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • High predicted error rate
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0103A09
Clone
Clone name
hba-103a9
LE_HBa0103A09
C03HBa0103A09
P103A09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found