Clone Read LE_HBa0209H15_SP6_371680

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0209H15_SP6_371680
Primer
SP6
ID from Seq. Facility
LE_HBa_209_H15-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
601 trimmed for vector and quality, 957 raw
Sequence
>LE_HBa0209H15_SP6_371680 (raw untrimmed)
GGTATTCAGGTATGATATAAGATGCGAATACCCTTTTTCTTCTTCTTTTTGTTGTTGATTTTTGTTTTCGCCTGCGCCTGGATCTTGTTACTGGTAAACA
ATTTCCTTAAACTTAGTATGGCTTAGGCAGATGGAAAGAAATCAAGTTATCTGCTTAGGCAGATGGAAAGTAATCAAGTTCTCCTTGTTGGCAACCAGGG
GTGTGGCCAAGTTATTAATCAAGTGGTTGAGAGCGCGACATCTTAGGTTCAAAACACTAGGTGACTCTTCTTATCTGTGGTGAGAGGTTAAATTAGTCGA
GGTAGTCTCCTAGATCTTTGATCAACACCATTGACCTAGGCCTATCTTTGGGTGTAACAATAATGTTGGCATTGGAGAGTTAATTTCTTGCAGGATCAAT
TACTTCACAACCCAATGCGTAGCTAAATAGAAAGTTTTGCGCAACATTATGAGTGTCAGATTATGCATGTGTTTTAGTTTTCTATATGCTTCACTAGATA
TCTATTTCCAGAAAGGTATATGCTGCACGACATATCTATGTTATAGAAACTTTACCTACATTGCTTGTATATAATGTTGCCTGTATGGTTATGTTTTATG
TGTTCATGCATATAGTTTTTGAGATGGCCAGACATACGCGAAAGATTCATATTTGATTTGATTGTTTGCCATCTGCAGTGGGTGGTTACAGCTGTTTTTA
TGGGGAAAATTGAACAATCAAAAAGGAACCTTGGGGAAAAGAATGATATTTTTTAACCTTTCTTCCTTTTTAAAGAAGAATTAAAACTTTTTCTTCCTTT
TTCACCAAAATAAAAAATACTTAAAAAGGGTTAGTTCTAAATGGGTTAAAAATGTTACCAAAAATGGAAATGCTTTTGTAAAAAAGGGAAAATTTCTTTG
GCTAACCTCTCAAATTTGTTTTCCCCTCCCAATCTTGCCCCATTTTTTCCATTTTAG
>LE_HBa0209H15_SP6_371680 (trimmed for quality and cloning vector)
ATTCAGGTATGATATAAGATGCGAATACCCTTTTTCTTCTTCTTTTTGTTGTTGATTTTTGTTTTCGCCTGCGCCTGGATCTTGTTACTGGTAAACAATT
TCCTTAAACTTAGTATGGCTTAGGCAGATGGAAAGAAATCAAGTTATCTGCTTAGGCAGATGGAAAGTAATCAAGTTCTCCTTGTTGGCAACCAGGGGTG
TGGCCAAGTTATTAATCAAGTGGTTGAGAGCGCGACATCTTAGGTTCAAAACACTAGGTGACTCTTCTTATCTGTGGTGAGAGGTTAAATTAGTCGAGGT
AGTCTCCTAGATCTTTGATCAACACCATTGACCTAGGCCTATCTTTGGGTGTAACAATAATGTTGGCATTGGAGAGTTAATTTCTTGCAGGATCAATTAC
TTCACAACCCAATGCGTAGCTAAATAGAAAGTTTTGCGCAACATTATGAGTGTCAGATTATGCATGTGTTTTAGTTTTCTATATGCTTCACTAGATATCT
ATTTCCAGAAAGGTATATGCTGCACGACATATCTATGTTATAGAAACTTTACCTACATTGCTTGTATATAATGTTGCCTGTATGGTTATGTTTTATGTGT
T

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.962377
Expected error %
0.169949
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0209H15
Clone
Clone name
hba-209h15
LE_HBa0209H15
P209H15
Clone type
BAC
Contamination
none
Estimated length
95,012
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found