Clone Read LE_HBa0240N09_SP6_377780

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0240N09_SP6_377780
Primer
SP6
ID from Seq. Facility
LE_HBa_240_N09-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
611 trimmed for vector and quality, 863 raw
Sequence
>LE_HBa0240N09_SP6_377780 (raw untrimmed)
AATCTTCCCAATTTCAACAGTACCCCAAATCAATTCCAACTCCATTCTTGTTGCCCTTTTGGATTCTCACTATACTGAGTTGTCTGAGCTTGTTGAAAAA
GCCCTTTTGCTTCAAACACTTGAAGAAGCTGTTTCTAAGCACAATATCACCATTTTTGCTCCTAAAAATGAAGCTCTGGAACGCGATTTAGACCCTGAAT
TCAAGCGTTTCTTGCTTGAACCTGGTAATCTTAAATCTCTACAGAATCTCTTGTTGTTTCACATGATTCCCACTCGCATTGTCTCCAAAAATTGGCCGGT
GCGTGGCCGTGTTCACTCCACTTTATACGCCGGAGAAGAAAACGTCCTTCAAATCTCCGATAAGAAAACAGAGAAATCAGTCAGCTCAGCTAAGATTATT
AAACAAGACGATATCGTTAAACCCGACGGAATCATCCACGGTATTGAGCGGGTTTTAATACCCAAATCAGTCCAGCAAGATTTCAACAACCGCCGTAGTC
TCCGGTCAATCTCCGCCGTGCTACCGGAAGGAGCACCAGAAGTTGACCCGAGAACCCACCGGTTGAAGAAACCCGTATCAGTACCTGCCGGTGCACCACC
TGTGCTGCCGGTATATGATGCTTTGGCGCCGGGNNNNTNTTNTTTNTTTNTTTTTTTTTTTTTTTTTTTTGTTTTTNTTTTTTTTTTTGTTTGTGTGGTG
TTTTTTGTTTTTGTGTTTGTTTGTTTTGGTATTTGTGTGGTTGTTTTTGATAGTGTATTAATAGTATATTGTGTGATAATAATGAGAATAGGATGGTGTT
TTTTTATAAGAATTTAATATTATTAGTTTTTTTTGATATAAATATATGTAATTTAATAATAAG
>LE_HBa0240N09_SP6_377780 (trimmed for quality and cloning vector)
CCAATTTCAACAGTACCCCAAATCAATTCCAACTCCATTCTTGTTGCCCTTTTGGATTCTCACTATACTGAGTTGTCTGAGCTTGTTGAAAAAGCCCTTT
TGCTTCAAACACTTGAAGAAGCTGTTTCTAAGCACAATATCACCATTTTTGCTCCTAAAAATGAAGCTCTGGAACGCGATTTAGACCCTGAATTCAAGCG
TTTCTTGCTTGAACCTGGTAATCTTAAATCTCTACAGAATCTCTTGTTGTTTCACATGATTCCCACTCGCATTGTCTCCAAAAATTGGCCGGTGCGTGGC
CGTGTTCACTCCACTTTATACGCCGGAGAAGAAAACGTCCTTCAAATCTCCGATAAGAAAACAGAGAAATCAGTCAGCTCAGCTAAGATTATTAAACAAG
ACGATATCGTTAAACCCGACGGAATCATCCACGGTATTGAGCGGGTTTTAATACCCAAATCAGTCCAGCAAGATTTCAACAACCGCCGTAGTCTCCGGTC
AATCTCCGCCGTGCTACCGGAAGGAGCACCAGAAGTTGACCCGAGAACCCACCGGTTGAAGAAACCCGTATCAGTACCTGCCGGTGCACCACCTGTGCTG
CCGGTATATGA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.983107
Expected error %
0.0452968
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0240N09
Clone
Clone name
hba-240n9
LE_HBa0240N09
P240N09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found