Clone Read LE_HBa0234E03_SP6_391975

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0234E03_SP6_391975
Primer
SP6
ID from Seq. Facility
LE_HBa_234_E03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
671 trimmed for vector and quality, 1002 raw
Sequence
>LE_HBa0234E03_SP6_391975 (raw untrimmed)
AAAGCGCCTNNCCACGTGCTNTCTGNGNNTTATAAAANNCTTTAATTAAGATGGTACCGGAGACTTCAATCACACAAATTATTAGGTGATCAAAACCAGG
ATTAGCCTTTCACTTAGTGTGGTATAGAAGAACATTAAACCCTGGAAGTCATCCTTATATATGTTGTTAGTCCCGCTTACGTTTCTTGTTGTCAGTTCAA
ACATCTTGGTTCTCAGAAATGCCATTTGGACTGATAATTTCACTCTGTTTAGTTGCATTGATCTGTATTTCAATGTTGGCAGAGGATTAGCAGGATGTTT
GGTCCACTATCTCGATTGAAAGATGTGGTTGTTGGGGGTGATCGCCGTGGTACGTTCATCAGAGGGAGTGGAGCAGCTCAACATTGAGATGATGATGATG
AAAATGAGTGAGTGAGCCAATGTTTTGTTTACTTGATATGCTAGCTTTGTTTCTTCAGTGTATCTGATTAACTTGCTTTTGACAGGGCATGATGCGAATA
TGTTATGTTCTTATGATGGGGTTGTATATTATGCACGCACTAGGGTGTCTTGATTGTGGGTTAAGTATGAAAGGTCGCAGCAGCCAGCCCTGTTTGATGT
TGATTCTCGCTCTTTGCACTAGAGTCTAGCTACGTTCTGAAAAATAGCATCTGGAAACTTTATATCTTTTATACAATTTGTTCACAAAAGGTTTAAGTTG
TCTGCTGTCTGATTTTTCTCTTTTGGGGTTTCTGGAAAAAAAATGTACTGTATTATTTTCCTGATCTAATTTTGAGCCAGTGTAGAGCTCGTCAGTTTGT
ACATATCTGGTGTCCGATCGTTGCTGGATTTTACATACCGTTTTTTGGAATACCTTCCGGCTAAAATTACCGCCCCCAATTATTACCCTAGGGTTCCACC
AAAAATTTCCAAAAATTCCTTGGCCAAAAATTTATTGGGAAGAAATTTTCCCCCATGGGTTTGGGCCCCTTGTAATTTGAGAAAAAAAATTTCCATTTTT
TT
>LE_HBa0234E03_SP6_391975 (trimmed for quality and cloning vector)
TTAATTAAGATGGTACCGGAGACTTCAATCACACAAATTATTAGGTGATCAAAACCAGGATTAGCCTTTCACTTAGTGTGGTATAGAAGAACATTAAACC
CTGGAAGTCATCCTTATATATGTTGTTAGTCCCGCTTACGTTTCTTGTTGTCAGTTCAAACATCTTGGTTCTCAGAAATGCCATTTGGACTGATAATTTC
ACTCTGTTTAGTTGCATTGATCTGTATTTCAATGTTGGCAGAGGATTAGCAGGATGTTTGGTCCACTATCTCGATTGAAAGATGTGGTTGTTGGGGGTGA
TCGCCGTGGTACGTTCATCAGAGGGAGTGGAGCAGCTCAACATTGAGATGATGATGATGAAAATGAGTGAGTGAGCCAATGTTTTGTTTACTTGATATGC
TAGCTTTGTTTCTTCAGTGTATCTGATTAACTTGCTTTTGACAGGGCATGATGCGAATATGTTATGTTCTTATGATGGGGTTGTATATTATGCACGCACT
AGGGTGTCTTGATTGTGGGTTAAGTATGAAAGGTCGCAGCAGCCAGCCCTGTTTGATGTTGATTCTCGCTCTTTGCACTAGAGTCTAGCTACGTTCTGAA
AAATAGCATCTGGAAACTTTATATCTTTTATACAATTTGTTCACAAAAGGTTTAAGTTGTCTGCTGTCTGA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.963189
Expected error %
0.179959
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0234E03
Clone
Clone name
hba-234e3
LE_HBa0234E03
P234E03
Clone type
BAC
Contamination
none
Estimated length
79,601
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found