Clone Read LE_HBa0238O17_T7_399431

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0238O17_T7_399431
Primer
T7
ID from Seq. Facility
LE_HBa_238_O17-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
14 trimmed for vector and quality, 863 raw
Sequence
>LE_HBa0238O17_T7_399431 (raw untrimmed)
NNNGGGCACCAAGCGCACGACGGCCGCCAGTGTGAAGGAAACCAGCAGAAACCGCCCTAACAGCCCCCCCCTAGGAGGAGGCNNGCCAGCCCAGGGGCAC
CACGCCAAGCCCAAGCGACGGGCCGAAGGCAAAGACACCGGCGCCAAACGCAAAGCCGCAGAGCGAGCCACACCGGGACCAACCGACACAAGGCACCGAC
AACGCCCCCAGAGGCCGCACCACGGACGGCAACCACAACGCACATCCAAAAGACCGACGGGGCAGGCACGAGGAAAGCCAAAGCGGGGGGAAACGACCCA
ACGCGCCCACCAAGCAGGGGAGCGACAAACCACGGGGAACCAAGCAGGAAAAACGACACGACCCACAGACCCCAAACCAGAGGAACGGAGAACCACACCC
ACCAGGGACCAAAAGACAACACCGCCGCCACCGGAAAAAAGACCAGAACGACACGGAAAACCACCGAGGGAAACACGCAACAGCACCGCCCCAAGCGACG
AGAAACACGTGCGCCGAGACAACACCGAACAACAGGAGGACCGCGAACCCACAAGACAACGAACAAGACCGCAGCCACACACACGAAAGAACGGAGAAAA
CCAGCCAGAACAAAACACCAGACGCAAGCCACCACGAAAGCACGAGCGAACGGACAAACACCGGAGACAGGACTCGAAAAAGACGACGCCGAAAAAAACC
CAACCGGAAGGGAAAAAAGAACACCGAGGACCCAACCGAAGGCCAACAGCAAGAAAGAAAAACCCAACGCCCAGAGGGGAGGAACCCCGCAACCCAAAAA
CAAAACGAAAAGAGACCAAAAGAAGGAGCCAGGCCCCACACCCCGGCAAGAAAAAGCCCCCAA
>LE_HBa0238O17_T7_399431 (trimmed for quality and cloning vector)
CAGCAGAAACCGCC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for contaminants
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.31107
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0238O17
Clone
Clone name
hba-238o17
LE_HBa0238O17
P238O17
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found