Clone Read LE_HBa0246M13_T7_406075

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0246M13_T7_406075
Primer
T7
ID from Seq. Facility
LE_HBa_246_M13-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 2153 raw
Sequence
>LE_HBa0246M13_T7_406075 (raw untrimmed)
ACGGAAGAGAAACGACAGACAGAGACAAAACTCAGAGGAGAAGGAGAGGCACGATAGAAAGGAGCAACATAAAACACAAAACACACAGAAGAAAGAGGAA
GCGGACAAGACAAGACCGACAACCCCTCATATTAAGAAAGAGAGAGGAGAAAGANANAAGAAGANGANGAAAAAANGAANNAAGAANGAGAGAAGAGAGG
AGGGAGGAGAAGGGAGCCCTCTTTTATAAAGAGGAGNGNACNGCAACCANAGGACATAAGAGAGAAAAAAGAAGAGATGAAAGAGAGAGATAAACGAGCG
AAGCCAGAAGTGAAGAAAAAGAAGAAAGACAGGACAAAGGGACGGAGGGAGGCGGCCGATAGAGAATAAAGATGAAAGTGTGATACAATAGAACACCAAA
GAAGAAGAGTATCGAGGAAAGAGGGGCGACACAGAAGAGACAGAAACAGCGAGTGGGGAAGGAGGAGGAAGAGAGGAGAAGGAGAGAACACAGAAGACGT
GACGACGCATGAGATATACGAAACAGAGAGAAGAGAGAAGGAGTGAGAGCGAACAGACACGGCGAAGAAAGAGCACAAAACANCGAGAACGAAAATAGGC
GAAAGAGAACGAGCGAAGGGACGAGAAACAGAACAAGGATAGGAAGATCAGATGCNAACAGAAGAAGAGATATACGATACAAGAAGCGATATAGCAGGAA
TAGGAGAAGAGAGAAGGAAACACAGAGATTAGAAGAGGGAACGGAATAAGAATAGACGAAAGGACGAGAGAGAGAGCAGCACGAAAGTGAGGAGACGACA
AGATAGAGGATCAACAAGAACCATACAAGAAGAGAAGACAGAGATGGACTAGGAAAAACAACGTGAGGAATTACAGAGAAGCATAGAAGGAAGTGAAGAC
AAGAGCAGAAGAAATAAAGAGACGAGAGGAACGACGACGAACAGATAGGAGAACACACGAGAGAAAGACGAAGAGATGAAAGAGAGAAGATAGAACAGAA
GGCAGAGAGGGAAAGGAAAGTGACAAAACGAGAGAGAGAAAGAGATCACGGCAAAANGATAGTATGAACGAACGAGAGAGCGAGTGAGAAAGGCAGAAGG
GAAGACAGAAAACAGAAGAAGAAGGAAGAAGAAAAAGAGCAGTGAGAGAGAAATGAAAGAGCAGCAGCGAGAGAAGCACGGGAGTAAGCCAGAAACAGAC
AGACAGAGCGAAGAAAGCAAACATGAATGAGAGAGAGGAAGACAGAAGCGAGCAGAACGTGAAGACAGGAGAGAGAGAATAGGAACAGAAGAACAGAAAA
GGAACACAAAGCGACACAGAGAAGAGGAGGAAGATAAAGATGATAGAACAGAAGAAAGAGAANGAAATGAAGGAGGAGAAGAGTCATGGGAAAGCAAACG
AGAGCAAGAAGCGACACAGAGAATGATGAGAAGAGAAAAGAGATAAAGTACGATGAACGAAGGAAGAACAAGAACAAGAAAACACGAAAATAAGAAAGAG
AAAGAAGAGAANGAGGAGACGCGAGAGAGAAAACGAGGACGAGGGAGAGACAGAGAGACAGAAAGAGCATAGGAGAGATGACAGAGAAGAAGAGAAGGAA
GACAGAACAGAGAATAGAGAGAAAGGAAAGAGGACAACAGGATTGACAGACAGAAGAAGCTAGAAAATGAACGGACAGACGAAGAAAATAAGACGAGGAG
AGAGAAGAGAAATGAGAAAGAGAGGAGCAGAACGAATAGGACAGAACAGGAGGAGGAAGAAGAGCAGAAGACATGTAGAGATGATGGAGGACGCAATAGA
AGAGAAGAAGAAGACAGGAATGAGAGAAGACGGAGAGACACATTGAGTAGAATGAACGAAAGAGAATAGACTAGATAGAGAAGAGGACGAGAAGACAAGA
AACGATGAGAACATAGGTGACATACGAGGGAGACGCAGCAGACGAATGGACAGATGAGAACGAATATAGCGTAGAAGACGAAGAGGCGAACGACATGAGA
GATGATAGAGAACAGGAGCAGCAGAGAATAAGAGAGGAGAGAGNANGACGAAGAGAGAAGAGAGAGAGAGAGATAGAGAAGAGATGGAGANGAAAAGGAG
ATCGTGACATAACGACGCATGTGCAGCAGAAGATATGAAAGGAAACAGATAAA
>LE_HBa0246M13_T7_406075 (trimmed for quality and cloning vector)
GA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for contaminants
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.58518
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0246M13
Clone
Clone name
hba-246m13
LE_HBa0246M13
C10HBa0246M13
P246M13
Clone type
BAC
Contamination
none
Estimated length
55,424
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found