Clone Read LE_HBa0041H01_T7_42961

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0041H01_T7_42961
Primer
T7
ID from Seq. Facility
LE_HBa_041_H01-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
391 trimmed for vector and quality, 856 raw
Sequence
>LE_HBa0041H01_T7_42961 (trimmed for quality and cloning vector)
AGCTTTCACATAAAATCTGTTAACCCTTGGGGGGCACAAANAAACNAGCNCCANNGCANACACCCTTGTGGGGGCGANNAGAAANAANNAANNCANNANG
ACCCCACAAAANGAACAGCAACACCCGCAAAAGCCACCGCCACAGGACCANCCNNCAAAGAANAANGAAANNAGGCNGGAAAAACGCGGCGCACGCANAA
GGCACCAGGCCCAAGAGAACCGGAACAGCAACGACGACAGCAAGAAGCGAACAACACGAAACACAACGACGCCAANCAAGAGAAGACCAAAAAAAAAAAA
GCAACGAGAACACAGCAAAACAGCCAAGAGAGAGACAAACAAACACAAAAAGGCGAAGCACAACAGAAGAAAACCCGAAAAAAAAAAGCAA

This is probably not a useful sequence.

Problems:
  • High predicted error rate
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.929398
Expected error %
18.2983
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0041H01
Clone
Clone name
hba-41h1
LE_HBa0041H01
P041H01
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found