Clone Read LE_HBa0067A23_SP6_51116

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0067A23_SP6_51116
Primer
SP6
ID from Seq. Facility
LE_HBa_067_A23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 796 raw
Sequence
>LE_HBa0067A23_SP6_51116 (raw untrimmed)
CTGCCCCCCCCTCGCTGTGTAANNNGANANAAAAAAAAANNCAANNANAAAANAAAAAAAAAAAAAAAANAAAAAAAAGAAAAGGAAAAAAAAAAANAAA
AAAAAAGGANAAAAANNCAAAAANNANAAANAAAAAANNANAAAAAAAAAAAAANAAAAAAAAAAAAAAAANAAA
AAAAAAAAAAAAAAANAAAAAAAAA
NAAANNAAAAAAAAAANANAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAAAAAAAAAAAANNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAN
AANNANANANANAAAANAANNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNA
ANAAAANNAAANAAAANAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAANAAAAAAAAAAAAAAAA
AAAAAAAANANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAAAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNAAAAAAAAA
AAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAA
AAAAAAAAAANAANAAAAAAAAAAAAAAAAANAAAANAAAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAANAAAAAAAAAAAA
>LE_HBa0067A23_SP6_51116 (trimmed for quality and cloning vector)
AAA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • High predicted error rate
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
4.53054
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0067A23
Clone
Clone name
hba-67a23
LE_HBa0067A23
C12HBa0067A23
P067A23
Clone type
BAC
Contamination
none
Estimated length
101,478
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found