Clone Read LE_HBa0062D11_SP6_54308

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0062D11_SP6_54308
Primer
SP6
ID from Seq. Facility
LE_HBa_062_D11-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
497 trimmed for vector and quality, 835 raw
Sequence
>LE_HBa0062D11_SP6_54308 (raw untrimmed)
GTAGGGGACGGTCCGTCTTGGCTATGATGGTCCATCCTGTAGGTTCATCGTGAAGTTCAAAGAAGTGATCCCATTACCCGGATTCCAAGAGTTGAAGTGT
TTTGGAACGAAGACCTTCGACGGACCGTTGTGCCTATGACGATCCGTCATACTTACCATCGAGGGGAATGAAGATAGCAACAGAAGAAATTGCACAAGTA
TGGGACGGAGGAGTCCATGATGGTCCGTCGTGACCACGACGGTCCGTCGACCCAGCCGCGTTTTGGCAGATTTCCAGCAATTAGAATCCTTGTTTAATTA
GGTTTTTTGTTTTTTTATAAATAGTTCGAAAAACCTTGTTTTTTGAGGTTAGACTCCATAGTGTTAGACTCCGTATTGTTAGACTCTATGAGATTAGACA
TCAGATTTTTAGACTTTGTGTATTAGTGTTGGATTTTGAGATTCTTGCAAGTGATTTTTGGATATTAATCTAGAAAACTTTGGATTTTATTCTTTCTCAT
TGAAGTAAGTACATGAATTCGTATTTAATAAATTTTGATTATTGTGTTCATGGCTATGAATAACTAAACTCCATTAACAGGGTTGTGGGAACCATAATTC
AAAAAATGTATATAACTCAATCTATCTTTTTGTTTCTTTCTTTGTGTCTTGCATGTATTATCTACTTCTTCACGTTCTACTCTTTTTATCGAGACTTGTA
ATTCGTTATATATCTATTTTTAATTTTCCTCTTATATAATATGTTTGTCTATTAATATCGTTTATTATTTTTATTTTAATTTCTTTTCGTTTTATTTTTT
CTGTGTTCCTTAATATTGATAGTAAACTTATGTAG
>LE_HBa0062D11_SP6_54308 (trimmed for quality and cloning vector)
TATGATGGTCCATCCTGTAGGTTCATCGTGAAGTTCAAAGAAGTGATCCCATTACCCGGATTCCAAGAGTTGAAGTGTTTTGGAACGAAGACCTTCGACG
GACCGTTGTGCCTATGACGATCCGTCATACTTACCATCGAGGGGAATGAAGATAGCAACAGAAGAAATTGCACAAGTATGGGACGGAGGAGTCCATGATG
GTCCGTCGTGACCACGACGGTCCGTCGACCCAGCCGCGTTTTGGCAGATTTCCAGCAATTAGAATCCTTGTTTAATTAGGTTTTTTGTTTTTTTATAAAT
AGTTCGAAAAACCTTGTTTTTTGAGGTTAGACTCCATAGTGTTAGACTCCGTATTGTTAGACTCTATGAGATTAGACATCAGATTTTTAGACTTTGTGTA
TTAGTGTTGGATTTTGAGATTCTTGCAAGTGATTTTTGGATATTAATCTAGAAAACTTTGGATTTTATTCTTTCTCATTGAAGTAAGTACATGAATT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.958343
Expected error %
0.508296
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0062D11
Clone
Clone name
hba-62d11
LE_HBa0062D11
C02HBa0062D11
P062D11
Clone type
BAC
Contamination
none
Estimated length
41,496
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found