Clone Read LE_HBa0012D23_SP6_5948

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0012D23_SP6_5948
Primer
SP6
ID from Seq. Facility
LE_HBa_012_D23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
642 trimmed for vector and quality, 858 raw
Genbank Accession
Sequence
>LE_HBa0012D23_SP6_5948 (raw untrimmed)
TAAAAAGGCTTTCCCTCAAGTATGNACTGATTTGGTTGAGGTATAGGTATTCAACCTACCAACTGCAGGCAAGTACAGTATCCATTCCCTTATAGGTGTT
TATCAACCATCCACTAACTACAACAACATCTTATGACGATGAGAATCAAAACACTCTTGTGAAAGCACGGTTACCACCTGTCTTCTTTGGTTCCTTAAAA
TAGAACTCAGAACTACATTTCTTCGGTATATAAACAATGTCTTGAATTAAATTGTAAGTAAACCGAATATAATGCAACGTAATATGCTTAACACATGCAA
ATCAAATAAGTCAATCAACCAAACACAATATAAATTTTATCCCGAACTTAATTTAGGCCTTATCCCGCGTAACAAAACAAGTAAAAGTTAAATCCCTTAA
ACTCTAATCAAGTTGCAAACAAGAATCAACTAAACATTCACACAAAGTTCACAACTTTATTATAAAGATTGCATTTTTAAGCAATACCCACTAGCAATAA
CACAAAAACAAAATCAAAATCAAGACAAAAGGGGCTTTTTAACTTACTTTGAAGCTGCTTGTCCATATACCTAACCAAACAAACAAAGAAAAAAAAAACA
CAAAATCAAAAGTAAGAAACTAATTTCTGAACAAAAAATTATTAGAAAATTTTTAAAACAAATTTGTAAAAACTTACTTTTTGAGATCTGGAGGCTGACC
TGATCTGCTCATCTTTTTCTTCCTCTTCTTGTCTTTTGAGAGAGGAAACATGGGAGGAGATGAAAATTTTTCCCGATGCCTCAGCGGCTGCTTGGGGCTG
TTAAAAAAACCCCCTAAAAAAAGGTTTAAAAGGTCTTTTTGTTAAACTAGGTCCTTAA
>LE_HBa0012D23_SP6_5948 (trimmed for quality and cloning vector)
ATTTGGTTGAGGTATAGGTATTCAACCTACCAACTGCAGGCAAGTACAGTATCCATTCCCTTATAGGTGTTTATCAACCATCCACTAACTACAACAACAT
CTTATGACGATGAGAATCAAAACACTCTTGTGAAAGCACGGTTACCACCTGTCTTCTTTGGTTCCTTAAAATAGAACTCAGAACTACATTTCTTCGGTAT
ATAAACAATGTCTTGAATTAAATTGTAAGTAAACCGAATATAATGCAACGTAATATGCTTAACACATGCAAATCAAATAAGTCAATCAACCAAACACAAT
ATAAATTTTATCCCGAACTTAATTTAGGCCTTATCCCGCGTAACAAAACAAGTAAAAGTTAAATCCCTTAAACTCTAATCAAGTTGCAAACAAGAATCAA
CTAAACATTCACACAAAGTTCACAACTTTATTATAAAGATTGCATTTTTAAGCAATACCCACTAGCAATAACACAAAAACAAAATCAAAATCAAGACAAA
AGGGGCTTTTTAACTTACTTTGAAGCTGCTTGTCCATATACCTAACCAAACAAACAAAGAAAAAAAAAACACAAAATCAAAAGTAAGAAACTAATTTCTG
AACAAAAAATTATTAGAAAATTTTTAAAACAAATTTGTAAAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.910453
Expected error %
0.494513
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0012D23
Clone
Clone name
hba-12d23
LE_HBa0012D23
P012D23
Clone type
BAC
Contamination
none
Estimated length
94,157
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found