Clone Read LE_HBa0135G10_T7_61363

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0135G10_T7_61363
Primer
T7
ID from Seq. Facility
LE_HBa_135_G10-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
562 trimmed for vector and quality, 860 raw
Genbank Accession
Sequence
>LE_HBa0135G10_T7_61363 (trimmed for quality and cloning vector)
AGCTTAGCATCAATTCTTAACAACCCACATGCTGGAAAATCAGATGGATGGTGGTGGCCATCAAATTCCTCATCTCTTCCCGTAGTTCCTGAATTCACCC
CACTAAACCCACTTCCAAAACCCGGATCTGATATAGCCAGAACCGATTTTCTCCCTTACATTACATCCTTTTCCGACCCTTTTGCCCGTTTTAATGATAT
CCAACAGCACAGTAAATCCAGCCTCCTTGACGATCAAAATGGTGAAAATGCCCTTGTCGCATGTCTTCGCGAAGTGCCCTCTTTGTACTTCAAAGAAGAT
TTTCAGTTAGAGGATGGTGCCACCTTTAAAGCTGCCTGTCCATTTAGGACTACGGCTGAGAATTTGGTCATGCAAGAAAAATTGTCACAGTATTTGGATG
TAGTGGAGCTGCATTTGGTGAGGGAGATTTCTTTGCGTTCAAGTTCGTTTTTTGAGGCACAAGGGCAGCTGGAGGATCTGAATTCAAAGATTAGTTGAAG
GGTGTAAGAGGATCAGGGAAATTGTAAGATACAATAATGCTACTGGATATTTATTTGGTGGG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.974916
Expected error %
0.613328
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At4g19490.2 Score 192 E Value 3e-50 Identity 63.40% Align. Length 522bp (92.88%) Frame 2
68417.m02867 expressed protein
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At4g19490.1 Score 192 E Value 3e-50 Identity 63.40% Align. Length 522bp (92.88%) Frame 2
68417.m02866 expressed protein
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
ref|NP_193684.2| Score 192 E Value 1e-48 Identity 63.40% Align. Length 522bp (92.88%) Frame 2
expressed protein [Arabidopsis thaliana] ref|NP_849409.1| expressed protein [Arabidopsis thaliana]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
emb|CAB78951.1| Score 192 E Value 1e-48 Identity 63.40% Align. Length 522bp (92.88%) Frame 2
putative protein [Arabidopsis thaliana] emb|CAA16926.1| putative protein [Arabidopsis thaliana] pir||T05209 hypothetical protein F24J7.50 - Arabidopsis thaliana
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0135G10
Clone
Clone name
hba-135g10
LE_HBa0135G10
P135G10
Clone type
BAC
Contamination
none
Estimated length
88,697
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found