Clone Read LE_HBa0039A11_SP6_61844

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0039A11_SP6_61844
Primer
SP6
ID from Seq. Facility
LE_HBa_039_A11-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
531 trimmed for vector and quality, 846 raw
Genbank Accession
DU071048
Sequence
>LE_HBa0039A11_SP6_61844 (raw untrimmed)
GCGGGGGTTTTTTGTGACATATACCTTCGGGAGTTTTCGCCGGATTTATCGCCGGAATTTTATTTGCACCGGCCGGCCCATCCGAAACCCGATACCTCCA
CGAATATTACTCTCAGCTACCAAGAGTATCAAACTTGAATTTTCTTTTTATTTACTTTAATATAATATCAAAGCTTGAGTTACAGTTCGAATTGAAATTA
ATAGTAATTAAAAAATTGATTCAAGGTAAATCAACAACTAACATGTTGATTTCTGAGTTAATAAGTTAAAAGTTTATTAAATCAAGAAATAAATATCTAA
GTATATTATACTTTCTGCATTGTTCGTCATATTACGCTTTTCGAAAATTAATTTAATTAATTTTTAAAATTAAATTAGATCATAGTAATTCAATAGTTTA
AATAAAAAAATTAAATATTTTAAAAGTATATGAAAAATACTATAAATTGTAATTTTTAATATATGAATATGATGAAAAAATACATCTTAAATGTTAGTCA
AAATTTTAATAATTTGACTCTAAAAATAAAAATAGTGACAAACAATACCAAATAAAAGAAAGTAATAATAATAATATATTTCACGTTAGTCATTCGAACT
TGTTTATTTTTTACATAAATTTTCATTATTTGAGTTATTCATAAATATACTAGTTGTTTAAATGTTGCAGTTCGTTGGATTGATTTTTAAATCCTTTCAA
CCTTTCAATTAATTGATCCCCCAAGGGTTTGTTTATTTAAATTGCCATCTAAGTTAATAGAAATGTTATAAATATATGTATTTATTCGATTGGTTGCTCC
TCACTGTAATCTACAAAACTTTTCATATCTTTTTTTTTTTCAAAGG
>LE_HBa0039A11_SP6_61844 (trimmed for quality and cloning vector)
GCCGGAATTTTATTTGCACCGGCCGGCCCATCCGAAACCCGATACCTCCACGAATATTACTCTCAGCTACCAAGAGTATCAAACTTGAATTTTCTTTTTA
TTTACTTTAATATAATATCAAAGCTTGAGTTACAGTTCGAATTGAAATTAATAGTAATTAAAAAATTGATTCAAGGTAAATCAACAACTAACATGTTGAT
TTCTGAGTTAATAAGTTAAAAGTTTATTAAATCAAGAAATAAATATCTAAGTATATTATACTTTCTGCATTGTTCGTCATATTACGCTTTTCGAAAATTA
ATTTAATTAATTTTTAAAATTAAATTAGATCATAGTAATTCAATAGTTTAAATAAAAAAATTAAATATTTTAAAAGTATATGAAAAATACTATAAATTGT
AATTTTTAATATATGAATATGATGAAAAAATACATCTTAAATGTTAGTCAAAATTTTAATAATTTGACTCTAAAAATAAAAATAGTGACAAACAATACCA
AATAAAAGAAAGTAATAATAATAATATATTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.871844
Expected error %
0.676078
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0039A11
Clone
Clone name
hba-39a11
LE_HBa0039A11
C03HBa0039A11
P039A11
Clone type
BAC
Contamination
none
Estimated length
119,950
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found