Clone Read LE_HBa0048B13_SP6_63432

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0048B13_SP6_63432
Primer
SP6
ID from Seq. Facility
LE_HBa_048_B13-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
644 trimmed for vector and quality, 841 raw
Genbank Accession
DU071694
Sequence
>LE_HBa0048B13_SP6_63432 (raw untrimmed)
GTTTTGAAGGGTGGCTTCTTTCCGGCAGTTATCTAGGTCTATCATCATTCACCCCCTTCCCCCCTTCTATTTCCATATGCAGTCTTATTTCCAGCATCGT
TGAAAATAGTGTCTATGATGTTTTAGTGCTTGCACACACGTAGAAAATTAAGATGATAAAAACTTCATGCATCCCATATTTATAACCCTACTCCTAAATA
GCTTTTCCTAATTCAGTTGTCAGACATACCTTAATAACATTAATGGGTGAATGCAACTGCATACAGCATAATATGTAGGCATTAGAAGTAGTACTACAAC
AATAATATATTCCGTATAATCCCACAAGTGGGTCTAGATAGGTAGAGTGTAAGCAAACGTTACTCTACAACGAGCTATTTCCTTGAGACCTTCGACTCAA
GTAGCACATCTCAAAGCAGTTTTATATGGTAATGAAAGCAGTAGCTAAGGAAAACATAATATGATAACTGAAGAAATGAAAACAACATGCGCTAGAAGTA
CTAAATTCAGAATTATGATGGAGTGAATCACAATGCTAATAGTAAAGTCTAAAAGGCTGGCAGAAAAATAATAGAGAATTGCTGAAAACATCCAAATTGC
TTCATACTTATCTCTAATCCATACCTCATCCAGGGAATTATAATTGTCTGCAATCCTCGAGTATCTCCGATCAAGCCTTTGGTCGTGGAGCATGAATATG
AGTCCTAGATTCATGTTCATGAGAAACATAAATTCTGTTTGGGGGTTGTGAAAAAATAATTGTGTTGGTTGCTGTGGGGGAAAATTTCTGTTTGGGAAGG
GTGGTGGTGGGTTCTGAACGATTTAATATCTTTTTTATTTN
>LE_HBa0048B13_SP6_63432 (trimmed for quality and cloning vector)
GCAGTTATCTAGGTCTATCATCATTCACCCCCTTCCCCCCTTCTATTTCCATATGCAGTCTTATTTCCAGCATCGTTGAAAATAGTGTCTATGATGTTTT
AGTGCTTGCACACACGTAGAAAATTAAGATGATAAAAACTTCATGCATCCCATATTTATAACCCTACTCCTAAATAGCTTTTCCTAATTCAGTTGTCAGA
CATACCTTAATAACATTAATGGGTGAATGCAACTGCATACAGCATAATATGTAGGCATTAGAAGTAGTACTACAACAATAATATATTCCGTATAATCCCA
CAAGTGGGTCTAGATAGGTAGAGTGTAAGCAAACGTTACTCTACAACGAGCTATTTCCTTGAGACCTTCGACTCAAGTAGCACATCTCAAAGCAGTTTTA
TATGGTAATGAAAGCAGTAGCTAAGGAAAACATAATATGATAACTGAAGAAATGAAAACAACATGCGCTAGAAGTACTAAATTCAGAATTATGATGGAGT
GAATCACAATGCTAATAGTAAAGTCTAAAAGGCTGGCAGAAAAATAATAGAGAATTGCTGAAAACATCCAAATTGCTTCATACTTATCTCTAATCCATAC
CTCATCCAGGGAATTATAATTGTCTGCAATCCTCGAGTATCTCC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.954881
Expected error %
0.162306
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0048B13
Clone
Clone name
hba-48b13
LE_HBa0048B13
C02HBa0048B13
P048B13
Clone type
BAC
Contamination
none
Estimated length
99,584
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found