Clone Read LE_HBa0186E13_SP6_65880

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0186E13_SP6_65880
Primer
SP6
ID from Seq. Facility
LE_HBa_186_E13-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 770 raw
Sequence
>LE_HBa0186E13_SP6_65880 (raw untrimmed)
TTTTGTATATGCACCACACTCTTTACTGACCGACCGACAAGGCGCCGGNNNNNNNNNNCNNCNNNNNCNNNCCCCCNNCNCNNNCCCCCCNCNNCCCCCC
CCCNCCCNCTTCCCNNAGGGGGNNNNNNNCNNNCNCCNNCNCCNNNNCNNNCCNCGGCNCCGCCGCNNNCCCCNGGCCGCNGGGGGCGGGCCCCGGCCGC
CGCCGCGGCGGCNCNGGGGCNCCCCCCCCCCCGGCGCCCCCCGCCCCCCCCCCCCCCGCCGGGCCCGCCGCGGGGGCGNCCGGGCCCCCGGCCCCGCCCN
CCNGCGCCCCCGCCGCNCGCGNCCCGCCCNCCCCCCCCCGGCCCCGGGGCCCNGCCCCCCCGCCCGGCCGCGGGGCGCGGGGGCCCCCNCCNCGNNGCGG
NGNCCGGGCCGGCCCNNCGCGGGCNCCCGGCGGCGGCGCCGGCGNCCGGCCGCCCGGGGCGCGGGGCCGCCCCGGGCGCNCGCCGCGCGCGCGGGCGCGG
CCCCNCGNCNCGCCCCGCGCGGCCNGCCCGCCGGGCCGGCGCGGGCGGGGCNNNGCGCNCGNGGGGGCGGGCGCGCGCGGGCCNCGCGCGGCGCCCCCGG
GCCCGCCCGCCCCCCCCGCCCCNCCGCCGCCGGCCGCCGCGGCCCGCGCCGGCGCCCCCCCCGCGGCGCGCCCNGCGGGCCGCGCCGCCGCNCNGGCGGC
CNGGCCGCNCCGGGNNCNCCCGNNGCGCGCGCCCCGCGCCCCCCCCCCCCCGCCCCCCGCCGCCCGCCGC
>LE_HBa0186E13_SP6_65880 (trimmed for quality and cloning vector)
CC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.73925
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0186E13
Clone
Clone name
hba-186e13
LE_HBa0186E13
P186E13
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found