Clone Read LE_HBa0138O11_SP6_70964

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0138O11_SP6_70964
Primer
SP6
ID from Seq. Facility
LE_HBa_138_O11-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
607 trimmed for vector and quality, 865 raw
Sequence
>LE_HBa0138O11_SP6_70964 (trimmed for quality and cloning vector)
TCTCCTCATAAGATAAATTATCATTGATCCCAATATCTTTTGTTGGTTTGATTAATGAACGATCGCCAATGAACTTCTTCAACATGGAGATGTGAAATAC
CGTATGAACTGCGGCTTACTCTTGTGGTAGCTCCAAATCATAAGATATATTACCTACAATTTTTTATATTATGTAAGGGAAGATATACCGTGGACTAAGC
TTCTCCCTAAAAAATCTAACAACACCTTTCATGGGCAAAACTATCAAGTATACCCAATCATTTGCTTAAAATTCTACGACTCTGTGCAATTTTCAACCTC
TCTTGAATCACTTTAACCATATACATATCTTGATGATCTAAATGTTACCCTATCAACCCTGCTTCCAACTTCAAAACATCTAATATGAGATCTATATCTT
CTCCCATAAAGAGTTTCATAAGGATTCATTTGTATGCTAGAGTGGTAACTATTATTGTAAGAAATTCAATATGATGTAGGTGATCATCCCAATTACCTTT
GAAATATATCACACAAGACATCAACATATCCTATAAGGTCTTAATAGTGCGTGCTTCTTGACCATTTGTATGAGGATGAAAGGAAGTACTTTAAGTTAAC
TTTTGAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.943267
Expected error %
0.440772
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38792.1| Score 127 E Value 4e-46 Identity 47.30% Align. Length 600bp (98.85%) Frame 3
putative gag-pol polyprotein [Solanum demissum] gb|AAT38791.1| putative gag-pol polyprotein [Solanum demissum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38790.1| Score 127 E Value 4e-46 Identity 47.30% Align. Length 600bp (98.85%) Frame 3
putative gag-pol polyprotein [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0138O11
Clone
Clone name
hba-138o11
LE_HBa0138O11
P138O11
Clone type
BAC
Contamination
none
Estimated length
106,463
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found