Clone Read LE_HBa0145L15_T7_71597

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0145L15_T7_71597
Primer
T7
ID from Seq. Facility
LE_HBa_145_L15-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
102 trimmed for vector and quality, 749 raw
Sequence
>LE_HBa0145L15_T7_71597 (raw untrimmed)
TACTTTACTTTGCCTTTATGGAGTTTACCTGAATTTCGACCGAATTTGACTAATGCATGAATTGTGCCATTTATATTGGTCGGATAGAATCGTGAAGAAA
GCTTTCTGGAACTCAAGACCTTGCTGACTACTGCACCTATCCTTACCTTGCCAGTGGAAGGAAAGAACTTCGTTGTTTATTGTGATGCATCCTATTCTGG
TTTGAGTGCAGTGCTAATGCAAGAGAAGAGTGTAATTGCTTATGCTTCGAGGCAATTAAAGGTGCATGAACATATATATCCTACCCATGATTTGTATGTG
GTTGCTACAGTGCTTGCATTACCGCAATAGAGACTTTATCTCTTTGGTGCCGAACTGCGAAGCTACACGGACCTACCATTCTTACTTCTTCTTTGTGCGA
ATTCTTAAAGTCTGTCCCGGATCTCACTTCCCCAGAGTATACAATGTAGCTACTTGTTTCCATCTACTTTTTATACATCTTTACTGCTTTTCTATACTTT
TATTCTCCGTCTCTCTATCTCTCTCTCTCCCTTCATCCCTTCTACCATCATCTTTTTGATAATACACTCTGCATGACTAATTACTAACTAAATAATATAC
AGTATTACTTTGCGAGTTTTTTCGTCTATCTATTACTGTTATCTGTGTTTCTTCTTTCTTGGTTTCTTCGTTTTTNATTCTTTCTTGATGAATCTTTTGT
ATCTCCTTTTGTACTTGCTTCATAAAAAGCATGGCAATAGGAATGATCT
>LE_HBa0145L15_T7_71597 (trimmed for quality and cloning vector)
GAAAGCTTTCTGGAACTCAAGACCTTGCTGACTACTGCACCTATCCTTACCTTGCCAGTGGAAGGAAAGAACTTCGTTGTTTATTGTGATGCATCCTATT
CT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.903226
Expected error %
0.606832
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0145L15
Clone
Clone name
hba-145l15
LE_HBa0145L15
P145L15
Clone type
BAC
Contamination
none
Estimated length
105,458
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found