Clone Read LE_HBa0033N20_T7_7191

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0033N20_T7_7191
Primer
T7
ID from Seq. Facility
LE_HBa_033_N20-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
810 trimmed for vector and quality, 856 raw
Genbank Accession
DU026552
Sequence
>LE_HBa0033N20_T7_7191 (raw untrimmed)
GACCCCGGGTCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTTAGCTGAAAGACTAAAAAGGTGATAAGCAAGCTAGTCAATAAACATCA
AATGGCCTTCAACAGATCATTGACGCAACTTTGATAGCAAGTGACTGTTGACTCAAGAATTACAGGGGAAGATCCTGACATCATGTGTAATTTGGACATA
GAGAATACCAGAAATTCCTGCTCAAAATTCTAGAGCAGATGAGTTTTGGGGAAAGATGGTTGATGTAGATTGCCTTTAGTATAAAAACCGTCAGGCATGG
AGGGTTTTCACAACATGATGAGAGTGTCTAAAATCATTGGATAAGGGGATTCACGATTGACAATCTTTTAGGGGAGGAGATGCACATATATCATCTACTT
TATGCAAATGACACAATCATTTTCTGTGAAACAAAGGCAAGTCAGATTTCATTCATAAGGATGACCTTGGTGATTTTCGAGGCAGTTTCTGGGCTAACAA
TAAACTGGAGGAAGAGCTGCATATTTCTATTAAGGAGGTTCCTCAAATACAAAGTTTGGCAACTATTTTGGGGTGCAGAGTGGAGCAGCTTCCAATGACC
TATTTAGGCATGCTGCTGGGACACAATCACAATGAGTTAGAAATATAGGATGGCATCATTGAGAAGACTAAAAAGAAATTAGCTAACTGGAAAACCCAAT
ACATCTCATTAGAAGGGAGAGTTACTTTTATAAACTCTTTCTCACTGCTTACTTATGTAATGTCACTGTTTGGAGGAAAGGCTTGACAAGCTAAGAAGAG
AATTTTTGTGGTTGGGAAACAAAGAATGAAAGGGCCGACATTTAGTTAAATGGCAG
>LE_HBa0033N20_T7_7191 (trimmed for quality and cloning vector)
AGCTTTTAGCTGAAAGACTAAAAAGGTGATAAGCAAGCTAGTCAATAAACATCAAATGGCCTTCAACAGATCATTGACGCAACTTTGATAGCAAGTGACT
GTTGACTCAAGAATTACAGGGGAAGATCCTGACATCATGTGTAATTTGGACATAGAGAATACCAGAAATTCCTGCTCAAAATTCTAGAGCAGATGAGTTT
TGGGGAAAGATGGTTGATGTAGATTGCCTTTAGTATAAAAACCGTCAGGCATGGAGGGTTTTCACAACATGATGAGAGTGTCTAAAATCATTGGATAAGG
GGATTCACGATTGACAATCTTTTAGGGGAGGAGATGCACATATATCATCTACTTTATGCAAATGACACAATCATTTTCTGTGAAACAAAGGCAAGTCAGA
TTTCATTCATAAGGATGACCTTGGTGATTTTCGAGGCAGTTTCTGGGCTAACAATAAACTGGAGGAAGAGCTGCATATTTCTATTAAGGAGGTTCCTCAA
ATACAAAGTTTGGCAACTATTTTGGGGTGCAGAGTGGAGCAGCTTCCAATGACCTATTTAGGCATGCTGCTGGGACACAATCACAATGAGTTAGAAATAT
AGGATGGCATCATTGAGAAGACTAAAAAGAAATTAGCTAACTGGAAAACCCAATACATCTCATTAGAAGGGAGAGTTACTTTTATAAACTCTTTCTCACT
GCTTACTTATGTAATGTCACTGTTTGGAGGAAAGGCTTGACAAGCTAAGAAGAGAATTTTTGTGGTTGGGAAACAAAGAATGAAAGGGCCGACATTTAGT
TAAATGGCAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.95368
Expected error %
0.0898422
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT40556.1| Score 86 E Value 9e-16 Identity 19.80% Align. Length 242bp (29.88%) Frame 1
hypothetical protein PGEC542.21 [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0033N20
Clone
Clone name
hba-33n20
LE_HBa0033N20
P033N20
Clone type
BAC
Contamination
none
Estimated length
76,392
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found