Genome: Solanum pimpinellifolium

Solanum pimpinellifolium is a wild tomato species that is most closely related to the domesticated Solanum lycopersicum.
S. pimpinellifolium LA1670 denovo genome  

Hitomi Takei, Kenta Shirasawa, Kosuke Kuwabara, Atsushi Toyoda, Yuma Matsuzawa, Shinji Iioka, Tohru Ariizumi, De novo genome assembly of two tomato ancestors, solanum pimpinellifolium and S. lycopersicum var. cerasiforme, by long-read sequencing, DNA Research, 2021;, dsaa029, https://doi.org/10.1093/dnares/dsaa029

Available Data 
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LA1670 genome contigs
S. pimpinellifolium LA2093 denovo genome  
Disclaimer and data access agreement 
The Boyce Thompson Institute is pleased to make the Solanum pimpinellifolium LA2093 genome sequence publicly available. The genome sequence is described in the following publication:

Wang, X., Gao, L., Jiao, C. et al. Genome of Solanum pimpinellifolium provides insights into structural variants during tomato breeding. Nat Commun 11, 5817 (2020). https://doi.org/10.1038/s41467-020-19682-0.

Assembly details 

The genome was sequenced at 103X coverage using PacBio technology with an estimated size of 923 Mb.

final assembly total length: 807,612,503 bp
longest contig: 35,406,112 bp
contig N50: 10,912,915 bp

number of gene models: 35,761
99% of the assembly is found in 12 chromosomes

Available Data 
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Draft genome LA1589  
Disclaimer and data access agreement 
The draft S. pimpinellifolium LA1589 genome was sequenced by a group of scientists at the Cold Spring Harbor Laboratory.
These data have been published and are freely accessible. Please cite Nature 485, 635-641 when using this resource.

Please contact D. Ware or Z. B. Lippman (E-mail: ware@cshl.edu or lippman@cshl.edu) with any questions.
Available Data 
Bulk Datasets (via FTP)
Genomic scaffolds
BLAST
Genomic scaffolds