Details for species Solanum pimpinellifolium
| Basic information |
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Scientific Name
Solanum pimpinellifolium
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Common name
currant tomato
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Description
Solanum pimpinellifolium is a wild tomato species very closely related to Solanum lycopersicum and hybridizes with it freely. Apparently native to coastal areas from northern Peru to central Chile. It has been widely used in QTL studies (1), especially in the localization of QTL for shape and fruit size (2, 3). More tomato genetic resources can be found in: * Tomato Genetic Resource Center (TGRC) |
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Synonyms
currant tomato, Solanum pimpinellifolium L., Lycopersicon pimpinellifolium (L.) Mill., Lycopersicon pimpinellifolium
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| Taxonomic information |
asterids, lamiids, Solanales, Solanaceae, Solanoideae, Solaneae, Solanum, Lycopersicon
| Images | [Add new image] |
| Image | Description | Type | |
|---|---|---|---|
 Solanum_pimpinellifolium_SOL100_NIJA44750092_fl_2 | Solanum pimpinellifolium. Photograph by Sandra Knapp. Copyright © by Sandra Knapp, provided under the Creative Commons licence | organism | |
 Solanum_pimpinellifolium_SOL100_NIJA44750092_fr_1 | Solanum pimpinellifolium. Photograph by Sandra Knapp. Copyright © by Sandra Knapp, provided under the Creative Commons licence | organism |
| External Links |
| Metabolic details |
See LycoCyc
 Genome data
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Genome data|
Ploidy
2n or 4n
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Genome size
N/A
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Chromosome number
12
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| Available loci |
| Available maps |
| Transcript Information
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| Libraries (1) |
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Attribution
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| Phenomic Details
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| SOL-100 Genome sequencing project data
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| Funding Agencies | CSHL (Lippman lab) | |
| Sequencing Center | CSHL | |
| Project start, end | 2011 | |
| Seed source | ||
| Genbank link | ||
| Accession | LA1589 | |
| Contact (name, email) | ||
| Project URL | http://www.ncbi.nlm.nih.gov/nuccore/AGFK00000000.1 |
| Project URL | http://www.tomatogenome.net | |
| Contact (name, email) | Richard Finkers, richard.finkers@wur.nl; Sander Peters, sander.peters@wur.nl | |
| Genbank link | ||
| Accession | N481, S. pimpinellifolium (Jusl.) Mill. var. pimpinellifolium. (EA02994) (LYC2798); fruit weight | |
| Seed source | IPK Gatersleben (LYC2798), origin: Czech Republic, http://www.ipk-gatersleben.de/ | |
| Project start, end | 01/2012 - 06/2013 | |
| Sequencing Center | Plant Research International Bioscience & WUR | |
| Funding Agencies | TTI-GG, EDV, industry & academics |
| Funding Agencies | TTI-GG, EDV, industry & academics | |
| Sequencing Center | Plant Research International Bioscience & WUR | |
| Project start, end | 01/2012 - 06/2013 | |
| Seed source | IPK Gatersleben (T 115), origin: Argentina, http://www.ipk-gatersleben.de/ | |
| Accession | S. pimpinellifolium (EA02960) (T115); plant architecture | |
| Genbank link | ||
| Contact (name, email) | Richard Finkers, richard.finkers@wur.nl; Sander Peters, sander.peters@wur.nl | |
| Project URL | http://www.tomatogenome.net |
| Accession | S. pimpinellifolium (Jusl.) Mill. (EA03058) (T495); collection site | |
| Genbank link | ||
| Contact (name, email) | Richard Finkers, richard.finkers@wur.nl; Sander Peters, sander.peters@wur.nl | |
| Project URL | http://www.tomatogenome.net | |
| Funding Agencies | TTI-GG, EDV, industry & academics | |
| Sequencing Center | Plant Research International Bioscience & WUR | |
| Project start, end | 01/2012 - 06/2013 | |
| Seed source | IPK Gatersleben (T495), origin: Guatemala, http://www.ipk-gatersleben.de/ |
| Funding Agencies | TTI-GG, EDV, industry & academics | |
| Sequencing Center | Plant Research International Bioscience & WUR | |
| Project start, end | 01/2012 - 06/2013 | |
| Seed source | TGRC (LA1278), http://tgrc.ucdavis.edu/Data/Acc/AccDetail.aspx?AccessionNum=LA1278 | |
| Genbank link | ||
| Accession | S. pimpinellifolium (LA1278) (TR00005); salinity/alkalilnity resistance; autogamous-SC | |
| Contact (name, email) | Richard Finkers, richard.finkers@wur.nl; Sander Peters, sander.peters@wur.nl | |
| Project URL | http://www.tomatogenome.net |
| Project URL | http://www.tomatogenome.net | |
| Contact (name, email) | Richard Finkers, richard.finkers@wur.nl; Sander Peters, sander.peters@wur.nl | |
| Genbank link | ||
| Accession | S. pimpinellifolium (LA1578) (EA00674); drought resistance; facultative-SC | |
| Seed source | TGRC (LA1578), origin: Peru, http://tgrc.ucdavis.edu/Data/Acc/AccDetail.aspx?AccessionNum=LA1578 | |
| Project start, end | 01/2012 - 06/2013 | |
| Sequencing Center | Plant Research International Bioscience & WUR | |
| Funding Agencies | TTI-GG, EDV, industry & academics |
| Genbank link | ||
| Accession | S. pimpinellifolium (LA1584) (EA00676) (PY8040); Whitefly resistance; facultative-SC | |
| Contact (name, email) | Richard Finkers, richard.finkers@wur.nl; Sander Peters, sander.peters@wur.nl | |
| Project URL | http://www.tomatogenome.net | |
| Funding Agencies | TTI-GG, EDV, industry & academics | |
| Sequencing Center | Plant Research International Bioscience, BGI & WUR | |
| Project start, end | 01/2012 - 06/2013 | |
| Seed source | TGRC (LA1584) (PY8040), origin: Peru, http://tgrc.ucdavis.edu/Data/Acc/AccDetail.aspx?AccessionNum=LA1584 |
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