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Potato locus 1-Aminocyclopropane-1-carboxylate synthase 2
Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
New Edit Delete
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Locus | PGSC0003DMG400028536 |
Locus name | 1-Aminocyclopropane-1-carboxylate synthase 2 |
Symbol | acs2 |
Gene activity | ACC synthase |
Description | |
Chromosome | 6 |
Arm |
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Registry name: | None | [Associate registry name] |
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Accession name:
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Alleles (0) | None | [Add new Allele] |
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Associated loci - graphical view | None |
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![]() ![]() | unprocessed genomic sequence region underlying this gene |
>PGSC0003DMG400028536 PGSC_DMv3_219_ch06:43300584..43306284
TGCTGATCATGTATATAAATACGATATAAGGAGAATAAAATAACCATCTAATGATTAATTGAAAGGGAATTTCACCATTC
CGGCACCGGACCAATTTTCTGGAAGGTTTTTCCCCGGAGAGAGATTGCTCCGACTTTCTCTCTCTCAATCTTAAGGTATT
TCATCTCTTTGCCTTAAATTTCCCCTGCGATTCGTGTAAGAATTTGATACATTTTGGTGTTTTTTTATAGCAGGCCCTGT
GAATTTTTTTATTTTCGTCTGTTCGTTGTTTATAGTGGCAGCATTGTTTCTAATCGGATCTATTTCAGCTTGGTTCATCC
AATTCATCGCAATCGCATGCATGGGGTAATGTATTTTTGGTCTCTATCATAGCTTAATTTTTATTTTATTTTTGGTTTAT
TCAATTAGGGTTTTTTTTTGGTTAGGCGTTTGAGTAGACATGGTTCCTGAGGAAAGGATATAGAATTTTTATCTATGAGT
ATATGACAATCATCTGAATTGGGCTTCAATATAAATAGATAGAGAGTATTTATATAGTTAACCCAACTAGTTTAGGGTTA
AGGTGTTCTTGATTGAAATTATTACTTTGAATAGTGATGGCCTTGAGGACCAGGCTTGTTGTTGTTATGAGTGAGTTGGA
ATTATTCTTTTTTGACTTCTAAATATATTTCCAAATACCCTGAAAGCAGCAAAGAAAGCCCGGCACACTTGTTATATCTA
CTAACGCTTCATCCTAACCATGATATAAAGCTGTTCTATAAAAGCTCAAGACAAGAAGAAAGCAAGAAAAGGATAGGATT
GCTTAAGGAAAGGAGTAAGTTTTAGTTTTTACCCAATGGTTGTTGAACTCGAGGTTGGTAATAAACTGAAGCTGCTCAGT
TTTCTAGCATAGCGGAGTGAGATATATTGAAGGAAGGAGAATAAACTTAACCTTCAACCACAAATGGGGTCCTTTAGGCA
GCCGATTGCCCGTTTGCTTCCACTGACTTACATTGTGAAAGCCCATCAATGAAATAATGAAATGAATCAATGACTGGGAA
GTACCTAATTTTCCCAAAAATTTGTAATCCAGAAATGATGTGTTTTTATAACTTTTAGGTTTTCGATTCTTTTATTTCTT
TATGAAGTAATTGTGAATAATGGTGGACCAAAAGATGGTAATTGAGGGATGCAGAATAACTTTTTATTCATATAATTTTG
ATACTTTTTGAAAAACTTGAAACGGAATTAGTGGCTAAGCTAATAATTAGCTCAAAGTGTGTGTAAGAGCTAATTGTCGG
GGGAAAGTTTGTCAGCTTAAGTTAGCATTTTCTTTTCCTAATTTAATTTCTTCTCTCCTGTTATTTCATTTTCAGCATAC
TTCATGTGGACGTAGCAGGTAGTATAAGAGCTCAATCAAACACTTGTATTGCACCATGATAAATGATAATACAATCTGCT
AGTTTTCTCCCAAAACTTCTCCTCATCTATACTCTTTTCTCTTATTCTTCTCTTCTCTGTTCTTCAATACCAATAATTTG
GTATTAGAACAATTATTAACATGTTTTTAAATGCAAAAATGTAGTTCACTTGTCTCTGAAGATTTAGTCAAGGAGTTTAC
AGTAGTTAAAACAATTACTTTCCTCAAAATGTAGGTCTCAAAGTTATTTACATCAAAAGGTAATCAAACTTTAATCTTGA
TGCTATTTGCTTAAATCTAGTCCATTCAATGACAGAAGAATGTTTACTAGTAATTGGTGTTACACTGACCTTGTCATCAC
ACAGTCCAAATTCCCAATCTGTCCATTCGTATGTGCTCCATAAGTCTGTAACTTATTAAAGCAATAACCAAATGTATATG
TAGTAGTATAGCCTCTAAACCTCATTAAGAAAGAGGTCGATACTGTTTTGATGATCTCTGGAAGAGTCGATCCTAATGAG
GTGGAAATGTTATATCCTGCTTGCCCTATAGCCATTTATCCTTTCCGTTGTTTATGCGCCATGGAAATTATTTTTGAATT
TTCTGACTAGAAGACGTCTCTTTTACGTATATGTATCCTAATTGATTCTTACAGAACAAATGCCATTTGTAACAGTGCAG
TGGTTGTCTGGGGTCCGTTAGTAAAATCAAATTAATTTCTTCAGTTCATGAGCCTCTGAATGAGAAGAAACATCTAGATC
ATTTAGTACATAAAGCTAAACTGTCGGCGGATTTTTGGACAACCAGTACGCGTGACATGGACAACTACAGTGCAGCTCAA
TCACAAGGAAGCATCTCGTCAATTAGTACATCTACTCAGACACCCGATGCTCATGGCGCTGCAAATACAAACAACCATTC
TGAATTTGTAAATCATGGTAGGTATTGGATCTTCTCTTGCTCATAACTTAATATCATTCCATGCCTTTTTTGTTATCCTG
GTTGTTAGATGAACCACGATGTTTTCATTGAAAACTCTTTATTCAACATCACTAGTATAAGAGATCTCAGTTGTCAATTG
AGAACTTTCGACATCTAAAGCAGTACTCATGCTTCAGCAATAAATTTCTTTCTTTCCTTTGTTCCCCGGTGCCTCTCTTT
ATCTTTTTTGGTGCGTTAGACCTCTGGTTAGCCATGGATCATATCTGTCATTATTCTTCTAGAAATGTTCCCTACAATGC
CCCTAGTGTTTTATGGTAGTCTTCAACACAAATAAGACCTGACGAGCAAATATGTGGCAAGAAAGTTGCTGCATTTGGTA
AATCTTGTGGGTACTTTTTTTTTTGTTGATAAAGTAGTGGTTACTTGTTATTAAATATCAGTAATTTTTTAAATTTTTTT
CAAATACCAGTTCTTGAGAATCTGGATGTTCCAGATAGTTCCTGCTAATCCCCTTGGCCCTCGGAGATTTTTTAGAAGTT
TGTGAACTTGCTCATTGTGTCTGTGTAAAAAGGTCCTAAGAGTAAGATTGATCAGCCAATAGGTTTTTGAAAAAATATAT
TTCTATGAGTTAACTTATGCAGCTAGTTCTTTCTTATCAGGATTTATTCGCTGGAACCAAATCAGACAGCAGTGGGTCGG
ACGTAAAAATCCTGAGAAGCAACAAAAACAGCTTCTTGAACCCAAATTAAGGTTAGATGTTATAATTTTTACCGAACTAT
CTGATAATTCAAGAACCCCACACTGTCATACTATAATTTGACTACAAATGATGTAGTATTTCAAGTTTTAGGTTCTCATT
AACCGAGGCATGATCTGTTTTCAATTTGGCCTAAATTTTAATTCTTTGATTAAAAATGAAGAAATTAATCAGTTATCATG
CTAGGCTGAAACTTATTTGGGTTGGGTTGGGTTGGGTTGGGGGAAGGTGCTTGAGGCCTGATTTGGAAGTAGATATGTTA
CTGGATTTGGTGCATTTCTTTTGGCATGGGTTTTTGTCTAGGTATTTGAGTGTGTGAATTCTGATCATAAAATGTAGCAT
TCTAGAGCTCTGGCATGGCAACTGTACAACATTTCACTACATCTTCTCTCTTCAACAAACTAGATTCAAACAAAAGAGTC
GAAACTACTTCTGATAGGCTTGATTTTTATTTGGCAAGTTGGGATACCAAAGGAGTATATTCAGCAGTTTATTAGTTGGA
TCGAAGACCTTTTGGTTCAGTGATCTTGTTTAATTGAAACCTGCTGTTAACTAATTCTAAAAGTCATAACTCTATAGAAC
TCCTTAAAGGTAAATATCCAATGTGAACATTGTTGAGAATATAATTAAATAATAAAAGTGTGCTCACTCTAGTAGCTTAA
GCTTTTAGATGAGATGGTCATATACTTCCACATGGTATCAAAGCAGGCAGAGGTCTGGAGATCAAATCTCACCCCGACCC
ATATCAAAAAGAAGTTTCACGTGCTTGGCCCTTGAAAAAAGAATCTAGCCCGCGTGTGAGGGGGCGTGTTGAGAATATAA
TTAAACAATATAAGTGTTCTCTCTCTAACAGCTTAAGTTTTTAGATAAGATGATCACACATTTCAACAAGCATGACAGTC
CTTGGAGTTTAGGTGTGGCTCTTTGACATGGCGATATATTATCAGTTGGTTAACTAGACAATACTGTAGTCATCTTCTGT
AGTACCAATTTCTATGTGATGGTTTTAGGATTTCCATTTAGTGTTGGGATAGTGTTATGAATCTTTAGGAAGGATTGATT
CACAAGGCGATATATAAATCAGCTCGTTAAAGGGAGGCTGAAACCTTAGTGTTCATTGAAAGAGAGAACTCCGATCTCTT
CAGCTCTGTAAAGGGAGACAGAAACCTTAGAGTTCAATGGAAGAGAGAACTCCGATCTCTTGCTTTTTGCTTAATTATGA
CTTACTGATTTATTCATCAAAAACCCCTTTAAATAAGAGTCTTATTACATCAATAGGAAGTCTAATTCTTATGAAAGTAG
GAGACCTAAATCTTATTCCAAACTAATAACTATAACTTAATCTAATCCTTATGAAACTCTAAAACTAAACCCTATTCTAG
AATAATAAATAAAACAACTAAAAATATAATTAAATACTTAAATTAATGACTTCCAACGCATTCCTAACAGATAGGAAGGT
CAAAATTATGTCTAAATACTTTCCTAAGGTTGGTCCTACATTAAGATTAACAACTGAAAGAGGAAAGGCTGCAGAAGCCA
GAGAGGATGATACTTGTCCGGGATTTGCATGGGTATGGAATTCAGATGTTCAGCATGAATTTTTGAGGAATAATCACGCT
AGGATATTTTGTTCTCTGCTCAATTAAATGTTTTCTATTGATGGATCATACTTCGATAGTAATTTTATTTTTGCAGTTGG
AATGCTACTTATGATAGTCTGCTGGGGAGCAACAAGCCATTTCCCAAGCGTATCCCACTTGCTGTAAGTCTGCTTGTTGA
AAAAAGCTTAAAATGTATTGAATGCTTCTCGTACTGTGCTCTATTCAACTTTCCAGCCGTTCTAAACATGTGCTTTATTT
AACTGTTTTCGGCTCATCATATAAAACAAACAGGAAATGGTAGATTTTCTTGTGGATGTTTGGGAGCAGGAAGGAATGTA
TGATTGAGATGTGTTGCAAGCTATAAGGTTGCGGATGAATCGTCAAGGGAGAGTAGTAGCCTTTTAGGATGATGTAAACT
TGATTTGCTTTGTGACAAAGAGGTTTCTGGATATATGGGGTGTTTTGTAAAGATATATATATATGTAACCTACCTTTTGT
ACATTTAAACAAACTATTGTGCTAGGAAACCTGTTGACGTTTATAAAAACTGAGGACTCTCGTCTGGTTCTTTCAGCAGA
TGTTACTTTCTTATGCTCTATTAACTTGATTAAGGGAAAATAATGAAAACTCGTTTAACGATCTTTTACACAATGGGATC
TTCCACATTTAAGCCAACCAAATTTGTGAAACTCTCTTTTGAAGCAGTAGTTATCTCATCGATAAACAATCACCTTCCAC
CAAGAGGGGTTAGTTACCCCTTCACCGAAGAGAGATTGTTTTTTATAGACCCTTGGCATTGATGTCATCAAAGTTACCTC
TTCCTCTGTTACGAGAGTGGTTGTTCTTGTTCTCACCTCTTGTTATCTTATCATGGAAGTGAACTTACCTAGATAATTAT
GATGTGGCCAATCGGACAAAGAAGCATGATCGATCGATTGATGTGAGTTAAGTTTAGACAAATAAGGATATTGATAGAAT
ACACAGAGAAATCAGAAATTT
TGCTGATCATGTATATAAATACGATATAAGGAGAATAAAATAACCATCTAATGATTAATTGAAAGGGAATTTCACCATTC
CGGCACCGGACCAATTTTCTGGAAGGTTTTTCCCCGGAGAGAGATTGCTCCGACTTTCTCTCTCTCAATCTTAAGGTATT
TCATCTCTTTGCCTTAAATTTCCCCTGCGATTCGTGTAAGAATTTGATACATTTTGGTGTTTTTTTATAGCAGGCCCTGT
GAATTTTTTTATTTTCGTCTGTTCGTTGTTTATAGTGGCAGCATTGTTTCTAATCGGATCTATTTCAGCTTGGTTCATCC
AATTCATCGCAATCGCATGCATGGGGTAATGTATTTTTGGTCTCTATCATAGCTTAATTTTTATTTTATTTTTGGTTTAT
TCAATTAGGGTTTTTTTTTGGTTAGGCGTTTGAGTAGACATGGTTCCTGAGGAAAGGATATAGAATTTTTATCTATGAGT
ATATGACAATCATCTGAATTGGGCTTCAATATAAATAGATAGAGAGTATTTATATAGTTAACCCAACTAGTTTAGGGTTA
AGGTGTTCTTGATTGAAATTATTACTTTGAATAGTGATGGCCTTGAGGACCAGGCTTGTTGTTGTTATGAGTGAGTTGGA
ATTATTCTTTTTTGACTTCTAAATATATTTCCAAATACCCTGAAAGCAGCAAAGAAAGCCCGGCACACTTGTTATATCTA
CTAACGCTTCATCCTAACCATGATATAAAGCTGTTCTATAAAAGCTCAAGACAAGAAGAAAGCAAGAAAAGGATAGGATT
GCTTAAGGAAAGGAGTAAGTTTTAGTTTTTACCCAATGGTTGTTGAACTCGAGGTTGGTAATAAACTGAAGCTGCTCAGT
TTTCTAGCATAGCGGAGTGAGATATATTGAAGGAAGGAGAATAAACTTAACCTTCAACCACAAATGGGGTCCTTTAGGCA
GCCGATTGCCCGTTTGCTTCCACTGACTTACATTGTGAAAGCCCATCAATGAAATAATGAAATGAATCAATGACTGGGAA
GTACCTAATTTTCCCAAAAATTTGTAATCCAGAAATGATGTGTTTTTATAACTTTTAGGTTTTCGATTCTTTTATTTCTT
TATGAAGTAATTGTGAATAATGGTGGACCAAAAGATGGTAATTGAGGGATGCAGAATAACTTTTTATTCATATAATTTTG
ATACTTTTTGAAAAACTTGAAACGGAATTAGTGGCTAAGCTAATAATTAGCTCAAAGTGTGTGTAAGAGCTAATTGTCGG
GGGAAAGTTTGTCAGCTTAAGTTAGCATTTTCTTTTCCTAATTTAATTTCTTCTCTCCTGTTATTTCATTTTCAGCATAC
TTCATGTGGACGTAGCAGGTAGTATAAGAGCTCAATCAAACACTTGTATTGCACCATGATAAATGATAATACAATCTGCT
AGTTTTCTCCCAAAACTTCTCCTCATCTATACTCTTTTCTCTTATTCTTCTCTTCTCTGTTCTTCAATACCAATAATTTG
GTATTAGAACAATTATTAACATGTTTTTAAATGCAAAAATGTAGTTCACTTGTCTCTGAAGATTTAGTCAAGGAGTTTAC
AGTAGTTAAAACAATTACTTTCCTCAAAATGTAGGTCTCAAAGTTATTTACATCAAAAGGTAATCAAACTTTAATCTTGA
TGCTATTTGCTTAAATCTAGTCCATTCAATGACAGAAGAATGTTTACTAGTAATTGGTGTTACACTGACCTTGTCATCAC
ACAGTCCAAATTCCCAATCTGTCCATTCGTATGTGCTCCATAAGTCTGTAACTTATTAAAGCAATAACCAAATGTATATG
TAGTAGTATAGCCTCTAAACCTCATTAAGAAAGAGGTCGATACTGTTTTGATGATCTCTGGAAGAGTCGATCCTAATGAG
GTGGAAATGTTATATCCTGCTTGCCCTATAGCCATTTATCCTTTCCGTTGTTTATGCGCCATGGAAATTATTTTTGAATT
TTCTGACTAGAAGACGTCTCTTTTACGTATATGTATCCTAATTGATTCTTACAGAACAAATGCCATTTGTAACAGTGCAG
TGGTTGTCTGGGGTCCGTTAGTAAAATCAAATTAATTTCTTCAGTTCATGAGCCTCTGAATGAGAAGAAACATCTAGATC
ATTTAGTACATAAAGCTAAACTGTCGGCGGATTTTTGGACAACCAGTACGCGTGACATGGACAACTACAGTGCAGCTCAA
TCACAAGGAAGCATCTCGTCAATTAGTACATCTACTCAGACACCCGATGCTCATGGCGCTGCAAATACAAACAACCATTC
TGAATTTGTAAATCATGGTAGGTATTGGATCTTCTCTTGCTCATAACTTAATATCATTCCATGCCTTTTTTGTTATCCTG
GTTGTTAGATGAACCACGATGTTTTCATTGAAAACTCTTTATTCAACATCACTAGTATAAGAGATCTCAGTTGTCAATTG
AGAACTTTCGACATCTAAAGCAGTACTCATGCTTCAGCAATAAATTTCTTTCTTTCCTTTGTTCCCCGGTGCCTCTCTTT
ATCTTTTTTGGTGCGTTAGACCTCTGGTTAGCCATGGATCATATCTGTCATTATTCTTCTAGAAATGTTCCCTACAATGC
CCCTAGTGTTTTATGGTAGTCTTCAACACAAATAAGACCTGACGAGCAAATATGTGGCAAGAAAGTTGCTGCATTTGGTA
AATCTTGTGGGTACTTTTTTTTTTGTTGATAAAGTAGTGGTTACTTGTTATTAAATATCAGTAATTTTTTAAATTTTTTT
CAAATACCAGTTCTTGAGAATCTGGATGTTCCAGATAGTTCCTGCTAATCCCCTTGGCCCTCGGAGATTTTTTAGAAGTT
TGTGAACTTGCTCATTGTGTCTGTGTAAAAAGGTCCTAAGAGTAAGATTGATCAGCCAATAGGTTTTTGAAAAAATATAT
TTCTATGAGTTAACTTATGCAGCTAGTTCTTTCTTATCAGGATTTATTCGCTGGAACCAAATCAGACAGCAGTGGGTCGG
ACGTAAAAATCCTGAGAAGCAACAAAAACAGCTTCTTGAACCCAAATTAAGGTTAGATGTTATAATTTTTACCGAACTAT
CTGATAATTCAAGAACCCCACACTGTCATACTATAATTTGACTACAAATGATGTAGTATTTCAAGTTTTAGGTTCTCATT
AACCGAGGCATGATCTGTTTTCAATTTGGCCTAAATTTTAATTCTTTGATTAAAAATGAAGAAATTAATCAGTTATCATG
CTAGGCTGAAACTTATTTGGGTTGGGTTGGGTTGGGTTGGGGGAAGGTGCTTGAGGCCTGATTTGGAAGTAGATATGTTA
CTGGATTTGGTGCATTTCTTTTGGCATGGGTTTTTGTCTAGGTATTTGAGTGTGTGAATTCTGATCATAAAATGTAGCAT
TCTAGAGCTCTGGCATGGCAACTGTACAACATTTCACTACATCTTCTCTCTTCAACAAACTAGATTCAAACAAAAGAGTC
GAAACTACTTCTGATAGGCTTGATTTTTATTTGGCAAGTTGGGATACCAAAGGAGTATATTCAGCAGTTTATTAGTTGGA
TCGAAGACCTTTTGGTTCAGTGATCTTGTTTAATTGAAACCTGCTGTTAACTAATTCTAAAAGTCATAACTCTATAGAAC
TCCTTAAAGGTAAATATCCAATGTGAACATTGTTGAGAATATAATTAAATAATAAAAGTGTGCTCACTCTAGTAGCTTAA
GCTTTTAGATGAGATGGTCATATACTTCCACATGGTATCAAAGCAGGCAGAGGTCTGGAGATCAAATCTCACCCCGACCC
ATATCAAAAAGAAGTTTCACGTGCTTGGCCCTTGAAAAAAGAATCTAGCCCGCGTGTGAGGGGGCGTGTTGAGAATATAA
TTAAACAATATAAGTGTTCTCTCTCTAACAGCTTAAGTTTTTAGATAAGATGATCACACATTTCAACAAGCATGACAGTC
CTTGGAGTTTAGGTGTGGCTCTTTGACATGGCGATATATTATCAGTTGGTTAACTAGACAATACTGTAGTCATCTTCTGT
AGTACCAATTTCTATGTGATGGTTTTAGGATTTCCATTTAGTGTTGGGATAGTGTTATGAATCTTTAGGAAGGATTGATT
CACAAGGCGATATATAAATCAGCTCGTTAAAGGGAGGCTGAAACCTTAGTGTTCATTGAAAGAGAGAACTCCGATCTCTT
CAGCTCTGTAAAGGGAGACAGAAACCTTAGAGTTCAATGGAAGAGAGAACTCCGATCTCTTGCTTTTTGCTTAATTATGA
CTTACTGATTTATTCATCAAAAACCCCTTTAAATAAGAGTCTTATTACATCAATAGGAAGTCTAATTCTTATGAAAGTAG
GAGACCTAAATCTTATTCCAAACTAATAACTATAACTTAATCTAATCCTTATGAAACTCTAAAACTAAACCCTATTCTAG
AATAATAAATAAAACAACTAAAAATATAATTAAATACTTAAATTAATGACTTCCAACGCATTCCTAACAGATAGGAAGGT
CAAAATTATGTCTAAATACTTTCCTAAGGTTGGTCCTACATTAAGATTAACAACTGAAAGAGGAAAGGCTGCAGAAGCCA
GAGAGGATGATACTTGTCCGGGATTTGCATGGGTATGGAATTCAGATGTTCAGCATGAATTTTTGAGGAATAATCACGCT
AGGATATTTTGTTCTCTGCTCAATTAAATGTTTTCTATTGATGGATCATACTTCGATAGTAATTTTATTTTTGCAGTTGG
AATGCTACTTATGATAGTCTGCTGGGGAGCAACAAGCCATTTCCCAAGCGTATCCCACTTGCTGTAAGTCTGCTTGTTGA
AAAAAGCTTAAAATGTATTGAATGCTTCTCGTACTGTGCTCTATTCAACTTTCCAGCCGTTCTAAACATGTGCTTTATTT
AACTGTTTTCGGCTCATCATATAAAACAAACAGGAAATGGTAGATTTTCTTGTGGATGTTTGGGAGCAGGAAGGAATGTA
TGATTGAGATGTGTTGCAAGCTATAAGGTTGCGGATGAATCGTCAAGGGAGAGTAGTAGCCTTTTAGGATGATGTAAACT
TGATTTGCTTTGTGACAAAGAGGTTTCTGGATATATGGGGTGTTTTGTAAAGATATATATATATGTAACCTACCTTTTGT
ACATTTAAACAAACTATTGTGCTAGGAAACCTGTTGACGTTTATAAAAACTGAGGACTCTCGTCTGGTTCTTTCAGCAGA
TGTTACTTTCTTATGCTCTATTAACTTGATTAAGGGAAAATAATGAAAACTCGTTTAACGATCTTTTACACAATGGGATC
TTCCACATTTAAGCCAACCAAATTTGTGAAACTCTCTTTTGAAGCAGTAGTTATCTCATCGATAAACAATCACCTTCCAC
CAAGAGGGGTTAGTTACCCCTTCACCGAAGAGAGATTGTTTTTTATAGACCCTTGGCATTGATGTCATCAAAGTTACCTC
TTCCTCTGTTACGAGAGTGGTTGTTCTTGTTCTCACCTCTTGTTATCTTATCATGGAAGTGAACTTACCTAGATAATTAT
GATGTGGCCAATCGGACAAAGAAGCATGATCGATCGATTGATGTGAGTTAAGTTTAGACAAATAAGGATATTGATAGAAT
ACACAGAGAAATCAGAAATTT
Download sequence region |
Get flanking sequences on PGSC_DMv3_219_ch06
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Ontology terms | None | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>PGSC0003DMT400073460 Conserved gene of unknown function
TGCTGATCATGTATATAAATACGATATAAGGAGAATAAAATAACCATCTAATGATTAATTGAAAGGGAATTTCACCATTC
CGGCACCGGACCAATTTTCTGGAAGGTTTTTCCCCGGAGAGAGATTGCTCCGACTTTCTCTCTCTCAATCTTAAGGCCCT
GTGAATTTTTTTATTTTCGTCTGTTCGTTGTTTATAGTGGCAGCATTGTTTCTAATCGGATCTATTTCAGCTTGGTTCAT
CCAATTCATCGCAATCGCATGCATGGGTGGTTGTCTGGGGTCCGTTAGTAAAATCAAATTAATTTCTTCAGTTCATGAGC
CTCTGAATGAGAAGAAACATCTAGATCATTTAGTACATAAAGCTAAACTGTCGGCGGATTTTTGGACAACCAGTACGCGT
GACATGGACAACTACAGTGCAGCTCAATCACAAGGAAGCATCTCGTCAATTAGTACATCTACTCAGACACCCGATGCTCA
TGGCGCTGCAAATACAAACAACCATTCTGAATTTGTAAATCATGGATTTATTCGCTGGAACCAAATCAGACAGCAGTGGG
TCGGACGTAAAAATCCTGAGAAGCAACAAAAACAGCTTCTTGAACCCAAATTAAGTTGGAATGCTACTTATGATAGTCTG
CTGGGGAGCAACAAGCCATTTCCCAAGCGTATCCCACTTGCTGAAATGGTAGATTTTCTTGTGGATGTTTGGGAGCAGGA
AGGAATGTATGATTGAGATGTGTTGCAAGCTATAAGGTTGCGGATGAATCGTCAAGGGAGAGTAGTAGCCTTTTAGGATG
ATGTAAACTTGATTTGCTTTGTGACAAAGAGGTTTCTGGATATATGGGGTGTTTTGTAAAGATATATATATATGTAACCT
ACCTTTTGTACATTTAAACAAACTATTGTGCTAGGAAACCTGTTGACGTTTATAAAAACTGAGGACTCTCGTCTGGTTCT
TTCAGCAGATGTTACTTTCTTATGCTCTATTAACTTGATTAAGGGAAAATAATGAAAACTCGTTTAACGATCTTTTACAC
AATGGGATCTTCCACATTTAAGCCAACCAAATTTGTGAAACTCTCTTTTGAAGCAGTAGTTATCTCATCGATAAACAATC
ACCTTCCACCAAGAGGGGTTAGTTACCCCTTCACCGAAGAGAGATTGTTTTTTATAGACCCTTGGCATTGATGTCATCAA
AGTTACCTCTTCCTCTGTTACGAGAGTGGTTGTTCTTGTTCTCACCTCTTGTTATCTTATCATGGAAGTGAACTTACCTA
GATAATTATGATGTGGCCAATCGGACAAAGAAGCATGATCGATCGATTGATGTGAGTTAAGTTTAGACAAATAAGGATAT
TGATAGAATACACAGAGAAATCAGAAATTT
TGCTGATCATGTATATAAATACGATATAAGGAGAATAAAATAACCATCTAATGATTAATTGAAAGGGAATTTCACCATTC
CGGCACCGGACCAATTTTCTGGAAGGTTTTTCCCCGGAGAGAGATTGCTCCGACTTTCTCTCTCTCAATCTTAAGGCCCT
GTGAATTTTTTTATTTTCGTCTGTTCGTTGTTTATAGTGGCAGCATTGTTTCTAATCGGATCTATTTCAGCTTGGTTCAT
CCAATTCATCGCAATCGCATGCATGGGTGGTTGTCTGGGGTCCGTTAGTAAAATCAAATTAATTTCTTCAGTTCATGAGC
CTCTGAATGAGAAGAAACATCTAGATCATTTAGTACATAAAGCTAAACTGTCGGCGGATTTTTGGACAACCAGTACGCGT
GACATGGACAACTACAGTGCAGCTCAATCACAAGGAAGCATCTCGTCAATTAGTACATCTACTCAGACACCCGATGCTCA
TGGCGCTGCAAATACAAACAACCATTCTGAATTTGTAAATCATGGATTTATTCGCTGGAACCAAATCAGACAGCAGTGGG
TCGGACGTAAAAATCCTGAGAAGCAACAAAAACAGCTTCTTGAACCCAAATTAAGTTGGAATGCTACTTATGATAGTCTG
CTGGGGAGCAACAAGCCATTTCCCAAGCGTATCCCACTTGCTGAAATGGTAGATTTTCTTGTGGATGTTTGGGAGCAGGA
AGGAATGTATGATTGAGATGTGTTGCAAGCTATAAGGTTGCGGATGAATCGTCAAGGGAGAGTAGTAGCCTTTTAGGATG
ATGTAAACTTGATTTGCTTTGTGACAAAGAGGTTTCTGGATATATGGGGTGTTTTGTAAAGATATATATATATGTAACCT
ACCTTTTGTACATTTAAACAAACTATTGTGCTAGGAAACCTGTTGACGTTTATAAAAACTGAGGACTCTCGTCTGGTTCT
TTCAGCAGATGTTACTTTCTTATGCTCTATTAACTTGATTAAGGGAAAATAATGAAAACTCGTTTAACGATCTTTTACAC
AATGGGATCTTCCACATTTAAGCCAACCAAATTTGTGAAACTCTCTTTTGAAGCAGTAGTTATCTCATCGATAAACAATC
ACCTTCCACCAAGAGGGGTTAGTTACCCCTTCACCGAAGAGAGATTGTTTTTTATAGACCCTTGGCATTGATGTCATCAA
AGTTACCTCTTCCTCTGTTACGAGAGTGGTTGTTCTTGTTCTCACCTCTTGTTATCTTATCATGGAAGTGAACTTACCTA
GATAATTATGATGTGGCCAATCGGACAAAGAAGCATGATCGATCGATTGATGTGAGTTAAGTTTAGACAAATAAGGATAT
TGATAGAATACACAGAGAAATCAGAAATTT
![]() ![]() | translated polypeptide sequence |
>PGSC0003DMT400073460 Conserved gene of unknown function
MGGCLGSVSKIKLISSVHEPLNEKKHLDHLVHKAKLSADFWTTSTRDMDNYSAAQSQGSISSISTSTQTPDAHGAANTNN
HSEFVNHGFIRWNQIRQQWVGRKNPEKQQKQLLEPKLSWNATYDSLLGSNKPFPKRIPLAEMVDFLVDVWEQEGMYD*
MGGCLGSVSKIKLISSVHEPLNEKKHLDHLVHKAKLSADFWTTSTRDMDNYSAAQSQGSISSISTSTQTPDAHGAANTNN
HSEFVNHGFIRWNQIRQQWVGRKNPEKQQKQLLEPKLSWNATYDSLLGSNKPFPKRIPLAEMVDFLVDVWEQEGMYD*
![]() ![]() |
Ontology terms | None | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>PGSC0003DMT400073461 Conserved gene of unknown function
TGCTGATCATGTATATAAATACGATATAAGGAGAATAAAATAACCATCTAATGATTAATTGAAAGGGAATTTCACCATTC
CGGCACCGGACCAATTTTCTGGAAGGTTTTTCCCCGGAGAGAGATTGCTCCGACTTTCTCTCTCTCAATCTTAAGCAGGC
CCTGTGAATTTTTTTATTTTCGTCTGTTCGTTGTTTATAGTGGCAGCATTGTTTCTAATCGGATCTATTTCAGCTTGGTT
CATCCAATTCATCGCAATCGCATGCATGGGTGCAGTGGTTGTCTGGGGTCCGTTAGTAAAATCAAATTAATTTCTTCAGT
TCATGAGCCTCTGAATGAGAAGAAACATCTAGATCATTTAGTACATAAAGCTAAACTGTCGGCGGATTTTTGGACAACCA
GTACGCGTGACATGGACAACTACAGTGCAGCTCAATCACAAGGAAGCATCTCGTCAATTAGTACATCTACTCAGACACCC
GATGCTCATGGCGCTGCAAATACAAACAACCATTCTGAATTTGTAAATCATGGATTTATTCGCTGGAACCAAATCAGACA
GCAGTGGGTCGGACGTAAAAATCCTGAGAAGCAACAAAAACAGCTTCTTGAACCCAAATTAAGTTGGAATGCTACTTATG
ATAGTCTGCTGGGGAGCAACAAGCCATTTCCCAAGCGTATCCCACTTGCTGAAATGGTAGATTTTCTTGTGGATGTTTGG
GAGCAGGAAGGAATGTATGATTGAGATGTGTTGCAAGCTATAAGGTTGCGGATGAATCGTCAAGGGAGAGTAGTAGCCTT
TTAGGATGATGTAAACTTGATTTGCTTTGTGACAAAGAGGTTTCTGGATATATGGGGTGTTTTGTAAAGATATATATATA
TGTAACCTACCTTTTGTACATTTAAACAAACTATTGTGCTAGGAAACCTGTTGACGTTTATAAAAACTGAGGACTCTCGT
CTGGTTCTTTCAGCAGATGTTACTTTCTTATGCTCTATTAACTTGATTAAGGGAAAATAATGAAAACTCGTTTAACGATC
TTTTACACAATGGGATCTTCCACATTTAAGCCAACCAAATTTGTGAAACTCTCTTTTGAAGCAGTAGTTATCTCATCGAT
AAACAATCACCTTCCACCAAGAGGGGTTAGTTACCCCTTCACCGAAGAGAGATTGTTTTTTATAGACCCTTGGCATTGAT
GTCATCAAAGTTACCTCTTCCTCTGTTACGAGAGTGGTTGTTCTTGTTCTCACCTCTTGTTATCTTATCATGGAAGTGAA
CTTACCTAGATAATTATGATGTGGCCAATCGGACAAAGAAGCATGATCGATCGATTGATGTGAGTTAAGTTTAGACAAAT
AAGGATATTGATAGAATACACAGAGAAATCAGAAATTT
TGCTGATCATGTATATAAATACGATATAAGGAGAATAAAATAACCATCTAATGATTAATTGAAAGGGAATTTCACCATTC
CGGCACCGGACCAATTTTCTGGAAGGTTTTTCCCCGGAGAGAGATTGCTCCGACTTTCTCTCTCTCAATCTTAAGCAGGC
CCTGTGAATTTTTTTATTTTCGTCTGTTCGTTGTTTATAGTGGCAGCATTGTTTCTAATCGGATCTATTTCAGCTTGGTT
CATCCAATTCATCGCAATCGCATGCATGGGTGCAGTGGTTGTCTGGGGTCCGTTAGTAAAATCAAATTAATTTCTTCAGT
TCATGAGCCTCTGAATGAGAAGAAACATCTAGATCATTTAGTACATAAAGCTAAACTGTCGGCGGATTTTTGGACAACCA
GTACGCGTGACATGGACAACTACAGTGCAGCTCAATCACAAGGAAGCATCTCGTCAATTAGTACATCTACTCAGACACCC
GATGCTCATGGCGCTGCAAATACAAACAACCATTCTGAATTTGTAAATCATGGATTTATTCGCTGGAACCAAATCAGACA
GCAGTGGGTCGGACGTAAAAATCCTGAGAAGCAACAAAAACAGCTTCTTGAACCCAAATTAAGTTGGAATGCTACTTATG
ATAGTCTGCTGGGGAGCAACAAGCCATTTCCCAAGCGTATCCCACTTGCTGAAATGGTAGATTTTCTTGTGGATGTTTGG
GAGCAGGAAGGAATGTATGATTGAGATGTGTTGCAAGCTATAAGGTTGCGGATGAATCGTCAAGGGAGAGTAGTAGCCTT
TTAGGATGATGTAAACTTGATTTGCTTTGTGACAAAGAGGTTTCTGGATATATGGGGTGTTTTGTAAAGATATATATATA
TGTAACCTACCTTTTGTACATTTAAACAAACTATTGTGCTAGGAAACCTGTTGACGTTTATAAAAACTGAGGACTCTCGT
CTGGTTCTTTCAGCAGATGTTACTTTCTTATGCTCTATTAACTTGATTAAGGGAAAATAATGAAAACTCGTTTAACGATC
TTTTACACAATGGGATCTTCCACATTTAAGCCAACCAAATTTGTGAAACTCTCTTTTGAAGCAGTAGTTATCTCATCGAT
AAACAATCACCTTCCACCAAGAGGGGTTAGTTACCCCTTCACCGAAGAGAGATTGTTTTTTATAGACCCTTGGCATTGAT
GTCATCAAAGTTACCTCTTCCTCTGTTACGAGAGTGGTTGTTCTTGTTCTCACCTCTTGTTATCTTATCATGGAAGTGAA
CTTACCTAGATAATTATGATGTGGCCAATCGGACAAAGAAGCATGATCGATCGATTGATGTGAGTTAAGTTTAGACAAAT
AAGGATATTGATAGAATACACAGAGAAATCAGAAATTT
![]() ![]() | translated polypeptide sequence |
>PGSC0003DMT400073461 Conserved gene of unknown function
MDNYSAAQSQGSISSISTSTQTPDAHGAANTNNHSEFVNHGFIRWNQIRQQWVGRKNPEKQQKQLLEPKLSWNATYDSLL
GSNKPFPKRIPLAEMVDFLVDVWEQEGMYD*
MDNYSAAQSQGSISSISTSTQTPDAHGAANTNNHSEFVNHGFIRWNQIRQQWVGRKNPEKQQKQLLEPKLSWNATYDSLL
GSNKPFPKRIPLAEMVDFLVDVWEQEGMYD*
![]() ![]() |
Ontology terms | None | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>PGSC0003DMT400073462 Conserved gene of unknown function
TGCTGATCATGTATATAAATACGATATAAGGAGAATAAAATAACCATCTAATGATTAATTGAAAGGGAATTTCACCATTC
CGGCACCGGACCAATTTTCTGGAAGGTTTTTCCCCGGAGAGAGATTGCTCCGACTTTCTCTCTCTCAATCTTAAGGCCCT
GTGAATTTTTTTATTTTCGTCTGTTCGTTGTTTATAGTGGCAGCATTGTTTCTAATCGGATCTATTTCAGCTTGGTTCAT
CCAATTCATCGCAATCGCATGCATGGGTGCAGTGGTTGTCTGGGGTCCGTTAGTAAAATCAAATTAATTTCTTCAGTTCA
TGAGCCTCTGAATGAGAAGAAACATCTAGATCATTTAGTACATAAAGCTAAACTGTCGGCGGATTTTTGGACAACCAGTA
CGCGTGACATGGACAACTACAGTGCAGCTCAATCACAAGGAAGCATCTCGTCAATTAGTACATCTACTCAGACACCCGAT
GCTCATGGCGCTGCAAATACAAACAACCATTCTGAATTTGTAAATCATGGATTTATTCGCTGGAACCAAATCAGACAGCA
GTGGGTCGGACGTAAAAATCCTGAGAAGCAACAAAAACAGCTTCTTGAACCCAAATTAAGTTGGAATGCTACTTATGATA
GTCTGCTGGGGAGCAACAAGCCATTTCCCAAGCGTATCCCACTTGCTGAAATGGTAGATTTTCTTGTGGATGTTTGGGAG
CAGGAAGGAATGTATGATTGAGATGTGTTGCAAGCTATAAGGTTGCGGATGAATCGTCAAGGGAGAGTAGTAGCCTTTTA
GGATGATGTAAACTTGATTTGCTTTGTGACAAAGAGGTTTCTGGATATATGGGGTGTTTTGTAAAGATATATATATATGT
AACCTACCTTTTGTACATTTAAACAAACTATTGTGCTAGGAAACCTGTTGACGTTTATAAAAACTGAGGACTCTCGTCTG
GTTCTTTCAGCAGATGTTACTTTCTTATGCTCTATTAACTTGATTAAGGGAAAATAATGAAAACTCGTTTAACGATCTTT
TACACAATGGGATCTTCCACATTTAAGCCAACCAAATTTGTGAAACTCTCTTTTGAAGCAGTAGTTATCTCATCGATAAA
CAATCACCTTCCACCAAGAGGGGTTAGTTACCCCTTCACCGAAGAGAGATTGTTTTTTATAGACCCTTGGCATTGATGTC
ATCAAAGTTACCTCTTCCTCTGTTACGAGAGTGGTTGTTCTTGTTCTCACCTCTTGTTATCTTATCATGGAAGTGAACTT
ACCTAGATAATTATGATGTGGCCAATCGGACAAAGAAGCATGATCGATCGATTGATGTGAGTTAAGTTTAGACAAATAAG
GATATTGATAGAATACACAGAGAAATCAGAAATTT
TGCTGATCATGTATATAAATACGATATAAGGAGAATAAAATAACCATCTAATGATTAATTGAAAGGGAATTTCACCATTC
CGGCACCGGACCAATTTTCTGGAAGGTTTTTCCCCGGAGAGAGATTGCTCCGACTTTCTCTCTCTCAATCTTAAGGCCCT
GTGAATTTTTTTATTTTCGTCTGTTCGTTGTTTATAGTGGCAGCATTGTTTCTAATCGGATCTATTTCAGCTTGGTTCAT
CCAATTCATCGCAATCGCATGCATGGGTGCAGTGGTTGTCTGGGGTCCGTTAGTAAAATCAAATTAATTTCTTCAGTTCA
TGAGCCTCTGAATGAGAAGAAACATCTAGATCATTTAGTACATAAAGCTAAACTGTCGGCGGATTTTTGGACAACCAGTA
CGCGTGACATGGACAACTACAGTGCAGCTCAATCACAAGGAAGCATCTCGTCAATTAGTACATCTACTCAGACACCCGAT
GCTCATGGCGCTGCAAATACAAACAACCATTCTGAATTTGTAAATCATGGATTTATTCGCTGGAACCAAATCAGACAGCA
GTGGGTCGGACGTAAAAATCCTGAGAAGCAACAAAAACAGCTTCTTGAACCCAAATTAAGTTGGAATGCTACTTATGATA
GTCTGCTGGGGAGCAACAAGCCATTTCCCAAGCGTATCCCACTTGCTGAAATGGTAGATTTTCTTGTGGATGTTTGGGAG
CAGGAAGGAATGTATGATTGAGATGTGTTGCAAGCTATAAGGTTGCGGATGAATCGTCAAGGGAGAGTAGTAGCCTTTTA
GGATGATGTAAACTTGATTTGCTTTGTGACAAAGAGGTTTCTGGATATATGGGGTGTTTTGTAAAGATATATATATATGT
AACCTACCTTTTGTACATTTAAACAAACTATTGTGCTAGGAAACCTGTTGACGTTTATAAAAACTGAGGACTCTCGTCTG
GTTCTTTCAGCAGATGTTACTTTCTTATGCTCTATTAACTTGATTAAGGGAAAATAATGAAAACTCGTTTAACGATCTTT
TACACAATGGGATCTTCCACATTTAAGCCAACCAAATTTGTGAAACTCTCTTTTGAAGCAGTAGTTATCTCATCGATAAA
CAATCACCTTCCACCAAGAGGGGTTAGTTACCCCTTCACCGAAGAGAGATTGTTTTTTATAGACCCTTGGCATTGATGTC
ATCAAAGTTACCTCTTCCTCTGTTACGAGAGTGGTTGTTCTTGTTCTCACCTCTTGTTATCTTATCATGGAAGTGAACTT
ACCTAGATAATTATGATGTGGCCAATCGGACAAAGAAGCATGATCGATCGATTGATGTGAGTTAAGTTTAGACAAATAAG
GATATTGATAGAATACACAGAGAAATCAGAAATTT
![]() ![]() | translated polypeptide sequence |
>PGSC0003DMT400073462 Conserved gene of unknown function
MDNYSAAQSQGSISSISTSTQTPDAHGAANTNNHSEFVNHGFIRWNQIRQQWVGRKNPEKQQKQLLEPKLSWNATYDSLL
GSNKPFPKRIPLAEMVDFLVDVWEQEGMYD*
MDNYSAAQSQGSISSISTSTQTPDAHGAANTNNHSEFVNHGFIRWNQIRQQWVGRKNPEKQQKQLLEPKLSWNATYDSLL
GSNKPFPKRIPLAEMVDFLVDVWEQEGMYD*
![]() ![]() |
Ontology terms | None | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>PGSC0003DMT400073459 Conserved gene of unknown function
GAACAAATGCCATTTGTAACAGTGCAGTGGTTGTCTGGGGTCCGTTAGTAAAATCAAATTAATTTCTTCAGTTCATGAGC
CTCTGAATGAGAAGAAACATCTAGATCATTTAGTACATAAAGCTAAACTGTCGGCGGATTTTTGGACAACCAGTACGCGT
GACATGGACAACTACAGTGCAGCTCAATCACAAGGAAGCATCTCGTCAATTAGTACATCTACTCAGACACCCGATGCTCA
TGGCGCTGCAAATACAAACAACCATTCTGAATTTGTAAATCATGGATTTATTCGCTGGAACCAAATCAGACAGCAGTGGG
TCGGACGTAAAAATCCTGAGAAGCAACAAAAACAGCTTCTTGAACCCAAATTAAGTTGGAATGCTACTTATGATAGTCTG
CTGGGGAGCAACAAGCCATTTCCCAAGCGTATCCCACTTGCTGAAATGGTAGATTTTCTTGTGGATGTTTGGGAGCAGGA
AGGAATGTATGATTGAGATGTGTTGCAAGCTATAAGGTTGCGGATGAATCGTCAAGGGAGAGTAGTAGCCTTTTAGGATG
ATGTAAACTTGATTTGCTTTGTGACAAAGAGGTTTCTGGATATATGGGGTGTTTTGTAAAGATATATATATATGTAACCT
ACCTTTTGTACATTTAAACAAACTATTGTGCTAGGAAACCTGTTGACGTTTATAAAAACTGAGGACTCTCGTCTGGTTCT
TTCAGCAGATGTTACTTTCTTATGCTCTATTAACTTGATTAAGGGAAAATAATGAAAACTCGTTTAACGATCTTTTACAC
AATGGGATCTTCCACATTTAAGCCAACCAAATTTGTGAAACTCTCTTTTGAAGCAGTAGTTATCTCATCGATAAACAATC
ACCTTCCACCAAGAGGGGTTAGTTACCCCTTCACCGAAGAGAGATTGTTTTTTATAGACCCTTGGCATTGATGTCATCAA
AGTTACCTCTTCCTCTGTTACGAGAGTGGTTGTTCTTGTTCTCACCTCTTGTTATCTTATCATGGAAGTGAACTTACCTA
GATAATTATGATGTGGCCAATCGGACAAAGAAGCATGATCGATCGATTGATGTGAGTTAAGTTTAGACAAATAAGGATAT
TGATAGAATACACAGAGAAATCAGAAATTT
GAACAAATGCCATTTGTAACAGTGCAGTGGTTGTCTGGGGTCCGTTAGTAAAATCAAATTAATTTCTTCAGTTCATGAGC
CTCTGAATGAGAAGAAACATCTAGATCATTTAGTACATAAAGCTAAACTGTCGGCGGATTTTTGGACAACCAGTACGCGT
GACATGGACAACTACAGTGCAGCTCAATCACAAGGAAGCATCTCGTCAATTAGTACATCTACTCAGACACCCGATGCTCA
TGGCGCTGCAAATACAAACAACCATTCTGAATTTGTAAATCATGGATTTATTCGCTGGAACCAAATCAGACAGCAGTGGG
TCGGACGTAAAAATCCTGAGAAGCAACAAAAACAGCTTCTTGAACCCAAATTAAGTTGGAATGCTACTTATGATAGTCTG
CTGGGGAGCAACAAGCCATTTCCCAAGCGTATCCCACTTGCTGAAATGGTAGATTTTCTTGTGGATGTTTGGGAGCAGGA
AGGAATGTATGATTGAGATGTGTTGCAAGCTATAAGGTTGCGGATGAATCGTCAAGGGAGAGTAGTAGCCTTTTAGGATG
ATGTAAACTTGATTTGCTTTGTGACAAAGAGGTTTCTGGATATATGGGGTGTTTTGTAAAGATATATATATATGTAACCT
ACCTTTTGTACATTTAAACAAACTATTGTGCTAGGAAACCTGTTGACGTTTATAAAAACTGAGGACTCTCGTCTGGTTCT
TTCAGCAGATGTTACTTTCTTATGCTCTATTAACTTGATTAAGGGAAAATAATGAAAACTCGTTTAACGATCTTTTACAC
AATGGGATCTTCCACATTTAAGCCAACCAAATTTGTGAAACTCTCTTTTGAAGCAGTAGTTATCTCATCGATAAACAATC
ACCTTCCACCAAGAGGGGTTAGTTACCCCTTCACCGAAGAGAGATTGTTTTTTATAGACCCTTGGCATTGATGTCATCAA
AGTTACCTCTTCCTCTGTTACGAGAGTGGTTGTTCTTGTTCTCACCTCTTGTTATCTTATCATGGAAGTGAACTTACCTA
GATAATTATGATGTGGCCAATCGGACAAAGAAGCATGATCGATCGATTGATGTGAGTTAAGTTTAGACAAATAAGGATAT
TGATAGAATACACAGAGAAATCAGAAATTT
![]() ![]() | translated polypeptide sequence |
>PGSC0003DMT400073459 Conserved gene of unknown function
MDNYSAAQSQGSISSISTSTQTPDAHGAANTNNHSEFVNHGFIRWNQIRQQWVGRKNPEKQQKQLLEPKLSWNATYDSLL
GSNKPFPKRIPLAEMVDFLVDVWEQEGMYD*
MDNYSAAQSQGSISSISTSTQTPDAHGAANTNNHSEFVNHGFIRWNQIRQQWVGRKNPEKQQKQLLEPKLSWNATYDSLL
GSNKPFPKRIPLAEMVDFLVDVWEQEGMYD*
![]() ![]() |
![]() ![]() | [Associate new unigene] |
Unigene ID:
SGN-U271041 Solanum tuberosum -- build 4 -- 6 members [Remove] [Blast]
SGN-U277371 Solanum tuberosum -- build 4 -- 4 members [Remove] [Blast]
SGN-U278412 Solanum tuberosum -- build 4 -- 3 members [Remove] [Blast]
SGN-U287158 Solanum tuberosum -- build 4 -- 1 members [Remove] [Blast]
SGN-U288025 Solanum tuberosum -- build 4 -- 1 members [Remove] [Blast]
SGN-U277371 Solanum tuberosum -- build 4 -- 4 members [Remove] [Blast]
SGN-U278412 Solanum tuberosum -- build 4 -- 3 members [Remove] [Blast]
SGN-U287158 Solanum tuberosum -- build 4 -- 1 members [Remove] [Blast]
SGN-U288025 Solanum tuberosum -- build 4 -- 1 members [Remove] [Blast]
![]() ![]() | [Associate new genbank sequence] |
Z27235 S.tuberosum (ST ACS2) gene for 1-Aminocyclopropane-1-carboxylate synthase.
Other genome matches | None |
![]() ![]() | [Associate publication] [Matching publications] |
Characterization of three members of the ACC synthase gene family in Solanum tuberosum L.
Molecular & general genetics : MGG (1995)
Show / hide abstract
Show / hide abstract
Two genomic clones corresponding to three members of the 1-aminocyclopropane-1-carboxylic acid (ACC) synthase gene family in potato (Solanum tuberosum L.) have been isolated and sequenced. Two highly homologous genes, ST-ACS1A and ST-ACS1B, transcribed in opposite directions were found in an 8.9 kb region. Their coding sequences are interrupted by two introns at identical positions. Their closest relative in tomato is the LE-ACS3 gene. The third gene in potato, ST-ACS2, was found in a 4 kb region and shows a gene structure similar to that of the tomato LE-ACS4 gene and to the mung bean VR-ACS4 and VR-ACS5 genes. Based on its lack of significant homology to the tomato gene family and its closeness to the VR-ACS4 and VR-ACS5 genes, we propose that LE-ACS7 represents an additional isoform in the tomato genome. Moreover, in a phylogenetic comparison of known ACC synthases, the ST-ACS2 isoform was grouped in a separate lineage together with the mung bean VR-ACS4 and VR-ACS5, and the moth orchid DS-ACS1A and DS-ACS1B gene products. Expression of the three potato genes was studied by reverse transcription-polymerase chain reaction on total RNA. The twin genes are positively regulated by indole-3-acetic acid in hypocotyls and expression is modulated by wounding in the leaves. The third gene is responsive to ethylene and wounding mainly in tubers. The roles of these three genes and of other members of the ACC synthase gene family in vegetative processes of potato such as tuberization, dormancy, and sprouting have yet to be determined.
Destéfano, Beltrán. van Caeneghem, W. Gielen, J. Richard, L. van Montagu, M. van der Straeten, D.
Molecular & general genetics : MGG.
1995.
246(4).
496-508.
![]() ![]() | [Add ontology annotations] |
biological_process
|
cellular_component
|
molecular_function
|
plant_anatomy
|
![]() ![]() |
none found
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