EST details — SGN-C34515
| Search information |
| Request: 34515 | Match: SGN-C34515 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C34515 | Clone name: cLEG-31-C23 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180695 is on microarray TOM1: SGN-S1-1-4.1.17.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180695 [TUS-35-A13] | Trace: SGN-T187453 | EST: SGN-E375685 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180695 [TUS-35-A13] | Trace: SGN-T187454 | EST: SGN-E375686 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E255017 | Length: 577 bp (969 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E255017 [] (trimmed)
GAACTTAAAAAGCATAACATATTAAAACCGTCTCAACATCTTATCTGGGAATTCGCTATAAAAACCAGAAAGTAGAAAGGCATCAGAGATGCTTT
TGTCACAGCTCATCAAGCAACTTGGATCAAACCAAATTGCTCAATAACTCCACTATCCTCAAAAGAGGCTAGAGAACCATGACAAAAGCTTCTGG
AGCCAAATCTATGACTGGTAAAATGTTCAAAACAAAATTGAAAATAGCTAATGCAATTAAACAAAACTAGGAAAGGCGTGACAGAATTGAGCTCA
GCTAGTAGATTCCCTGTATGGGCATCTTTGGTCTTGTACCGCAAAATACTAGATGAGATTGAAGCCAATGACTACAACAACTTCACAAAGAGAGC
ATATGTGAGCAAATCAAAGAAGTTGATTGCATTACCTATTGCATATGCAAAATCTCTTGTGCCTCCTACAAAAACTGCCTCTCTTCAAAGATAAA
GCATGAAATGAAGATATATATATATATATATATAGCAATATACATTAGAAGAAAAAAAGGAAGAAGAAATGTTGTTGTATTGATATAAATGTATA
TCATAAA
TGTCACAGCTCATCAAGCAACTTGGATCAAACCAAATTGCTCAATAACTCCACTATCCTCAAAAGAGGCTAGAGAACCATGACAAAAGCTTCTGG
AGCCAAATCTATGACTGGTAAAATGTTCAAAACAAAATTGAAAATAGCTAATGCAATTAAACAAAACTAGGAAAGGCGTGACAGAATTGAGCTCA
GCTAGTAGATTCCCTGTATGGGCATCTTTGGTCTTGTACCGCAAAATACTAGATGAGATTGAAGCCAATGACTACAACAACTTCACAAAGAGAGC
ATATGTGAGCAAATCAAAGAAGTTGATTGCATTACCTATTGCATATGCAAAATCTCTTGTGCCTCCTACAAAAACTGCCTCTCTTCAAAGATAAA
GCATGAAATGAAGATATATATATATATATATATAGCAATATACATTAGAAGAAAAAAAGGAAGAAGAAATGTTGTTGTATTGATATAAATGTATA
TCATAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E255017] | SGN-U578676 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69310 [Download] [View] | Facility Assigned ID: TBFEQ24TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.942 | Expected Error Rate: 0.0237 | Quality Trim Threshold: 12.5 |
Working
