EST details — SGN-E368352
| Search information |
| Request: 368352 | Match: SGN-E368352 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C176199 | Clone name: TUS-23-F5 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C176199 is on microarray TOM1 spot ID 1-1-4.2.11.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C21494 [cLED-34-D22] | Trace: SGN-T57278 | EST: SGN-E243504 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C176199 [TUS-23-F5] | Trace: SGN-T181278 | EST: SGN-E368351 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E368352 | Length: 677 bp (942 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E368352 [] (trimmed)
ACCCAGAATGTAATATATTAAACATCTTAAATCACATTACATTCTATGTCATCAATCATCTCCAAGTAAGAGATTGAATATGATGATATAAGATA
AATCAAACTTCATTGGGAGTTCTTTTTCCCTTCTAATTTTTTCTTTTTACCAATTATAATCATAATGATCTAGATCAAAGGAGGAAAGAAATTCA
TGAGATATAAAAGGTGAAGGTGGACATATGAGTCCACAATAATCAATTGAAGGAGCTACAAAATCAATTTTAGTATCCACTTCAAATGGTTGTGT
CCAAAAACTTCCACTTGTAATATCCTCCAAATTAGCTAATTCTTCTTGAAAAATGTCTTGTTGATAATCAATAGAGGATAAGTCTTCACTTGATG
ACCATTCTGAATTTTCCAATATTACATTTTCATGCATAGTATTATTATTATTATTATTATCACCAATTGCATTTTGATTTTCCACATTACTCTTT
CTTTTAGTAATATCACTTTCACTCTTCTTATTATTGCATTTCTTGCTTCCTTCACTTGAGTTATAATCAGCGCGCTTCTTCACTGTTGTGTGCCA
ATGATTCTTTATCTCGTTATCTGATCTTCCTGGCAAGTGACTTGCAATCGTTGACCACTTATTTCCAAGTTGAGCATGGAGGTTCAAGATGATTT
CATTTTTTTCTT
AATCAAACTTCATTGGGAGTTCTTTTTCCCTTCTAATTTTTTCTTTTTACCAATTATAATCATAATGATCTAGATCAAAGGAGGAAAGAAATTCA
TGAGATATAAAAGGTGAAGGTGGACATATGAGTCCACAATAATCAATTGAAGGAGCTACAAAATCAATTTTAGTATCCACTTCAAATGGTTGTGT
CCAAAAACTTCCACTTGTAATATCCTCCAAATTAGCTAATTCTTCTTGAAAAATGTCTTGTTGATAATCAATAGAGGATAAGTCTTCACTTGATG
ACCATTCTGAATTTTCCAATATTACATTTTCATGCATAGTATTATTATTATTATTATTATCACCAATTGCATTTTGATTTTCCACATTACTCTTT
CTTTTAGTAATATCACTTTCACTCTTCTTATTATTGCATTTCTTGCTTCCTTCACTTGAGTTATAATCAGCGCGCTTCTTCACTGTTGTGTGCCA
ATGATTCTTTATCTCGTTATCTGATCTTCCTGGCAAGTGACTTGCAATCGTTGACCACTTATTTCCAAGTTGAGCATGGAGGTTCAAGATGATTT
CATTTTTTTCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E368352] | SGN-U582818 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T181279 [Download][View] | Facility Assigned ID: FA0AAD11CC03RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.915 | Expected Error Rate: 0.0049 | Quality Trim Threshold: 14.5 |
Working
