EST details — SGN-E371456
| Search information |
| Request: 371456 | Match: SGN-E371456 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C178662 | Clone name: TUS-29-L20 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C178662 is on microarray TOM1 spot ID 1-1-5.4.3.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C72339 [cLER-1-O11] | Trace: SGN-T92076 | EST: SGN-E280522 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C72339 [cLER-1-O11] | Trace: SGN-T92077 | EST: SGN-E280523 | Direction: 3' | Facility: TIGR |
| Clone: SGN-C178662 [TUS-29-L20] | Trace: SGN-T184222 | EST: SGN-E371455 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E371456 | Length: 675 bp (900 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E371456 [] (trimmed)
TTTTTTTTCATGAACTGCATACTCATTAACATACAACGATCCATTGAATGTACTACAGACCAAAGGGATAATAAGAATAAACAGGAGAATCTCAA
AACTCACAATCAACAAAAACCAGAGCCTGCAGAAGGGTAGAGAAATACACTTCACTTATCATGACTAGACCTGATATTATCTTTGAACGACTGTG
AACGAGAACTGGGATTAGAGCCATTTGTTGCATTAAACAGGTTGGGATAAGAATAATATGTCTCATCGTCCATGGAAGGCAATCTCTGTGGTTGG
TGAAGACCCTGACCAGGATGATGAATATGGGAGATGGGAGACTCAACACCTACTGTTGAATCATCATATGAAGGAATATTCGACACCTGATGTTC
CAATGGACTGCCATGAAGTGGGCTGGGGATACCATCGGAGTTTGATGATTGGTGTTGGAGGTCTAAGTTAGGCTTTTCTAGGATGTGAGATTCTT
GTTTCTCAGAATAAAAGGGGTTTTCACTGGGACTTACAGGCACCTCTTCACTCCTTTTCCTGGTAAGCTCACTGATTCTAACCTGAGCAAGGCTA
GCTGCTGAGCGAGCAGCAGCTGCTGCACGTTCGGCTGAATCAGCAGCTGCTTGGGCAGCAGCCAATACATCTTTGCAATCCACATCAGTCTCAAC
TTTGGTCTTT
AACTCACAATCAACAAAAACCAGAGCCTGCAGAAGGGTAGAGAAATACACTTCACTTATCATGACTAGACCTGATATTATCTTTGAACGACTGTG
AACGAGAACTGGGATTAGAGCCATTTGTTGCATTAAACAGGTTGGGATAAGAATAATATGTCTCATCGTCCATGGAAGGCAATCTCTGTGGTTGG
TGAAGACCCTGACCAGGATGATGAATATGGGAGATGGGAGACTCAACACCTACTGTTGAATCATCATATGAAGGAATATTCGACACCTGATGTTC
CAATGGACTGCCATGAAGTGGGCTGGGGATACCATCGGAGTTTGATGATTGGTGTTGGAGGTCTAAGTTAGGCTTTTCTAGGATGTGAGATTCTT
GTTTCTCAGAATAAAAGGGGTTTTCACTGGGACTTACAGGCACCTCTTCACTCCTTTTCCTGGTAAGCTCACTGATTCTAACCTGAGCAAGGCTA
GCTGCTGAGCGAGCAGCAGCTGCTGCACGTTCGGCTGAATCAGCAGCTGCTTGGGCAGCAGCCAATACATCTTTGCAATCCACATCAGTCTCAAC
TTTGGTCTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E371456] | SGN-U579708 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T184223 [Download][View] | Facility Assigned ID: FA0AAD17DF10RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0052 | Quality Trim Threshold: 14.5 |
Working
