EST details — SGN-E371476
| Search information |
| Request: 371476 | Match: SGN-E371476 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C178758 | Clone name: TUS-29-P20 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C178758 is on microarray TOM1 spot ID 1-1-5.4.3.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C70625 [cLER-15-G24] | Trace: SGN-T95339 | EST: SGN-E282819 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C178758 [TUS-29-P20] | Trace: SGN-T184244 | EST: SGN-E371477 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E371476 | Length: 745 bp (854 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E371476 [] (trimmed)
ATAAAACACAAAAAGTCATATAAACCACAAGAATCAAAATTTACAAACAAAGCACCAAATCATTATCATATAATTAGGTACTCATAAATCCAAAA
CATAAACCGAATAGTACAAGACACAAAGAGTTTGTTGGAATTAAGACAAAAAAGAAAAAAGACCTAAGTAGCATTTAAAAACAAAGTGTCCCTAA
AGACAATTTTGTTCCTAATATGAAACTTAGTAGCCTTCTGGCTTGTAGGCAATGAAACTGATACACTGCACTTGACGCACATTGTCGAATCCAAT
GATTCTGACCCATGCTTGTGGGTATGCCTTTTTAGCCTCTTGAACCTCAGCCAACACTTGGGTTGCATCAGTGCACCCAAACATAGGCAACTTCC
ACATGGTCCAGTACCTTCCATCATAGTATCCTGGTGACTTGTTGTTCTCACGGTAGACAAATCCGTGCTCAGTCTCAAATTCCAAGCAAGGAACC
CATCCATTTTTCAAAAGGTACTCAATTTCACTAAGCAATTGCTCGTCAGACAAATCAGGAAGGTATGAGAGTGTCTCGTACTTCTTCATGTTAAT
TGGTGGCCACACCTGCATGCAGCTAACTCTTCCACCATTGCTAGCAATGGAAGTGATGTCAAGGTTTTGCTTCTTTGTAACAGGGAAAGTGGCTG
AAGATTTGAGACCAGTGAAAGGTGCAACCATGCTAGCTTGTGTAACATTGCTGCGTGTGGCAACAGCTGCTGAAGAATGA
CATAAACCGAATAGTACAAGACACAAAGAGTTTGTTGGAATTAAGACAAAAAAGAAAAAAGACCTAAGTAGCATTTAAAAACAAAGTGTCCCTAA
AGACAATTTTGTTCCTAATATGAAACTTAGTAGCCTTCTGGCTTGTAGGCAATGAAACTGATACACTGCACTTGACGCACATTGTCGAATCCAAT
GATTCTGACCCATGCTTGTGGGTATGCCTTTTTAGCCTCTTGAACCTCAGCCAACACTTGGGTTGCATCAGTGCACCCAAACATAGGCAACTTCC
ACATGGTCCAGTACCTTCCATCATAGTATCCTGGTGACTTGTTGTTCTCACGGTAGACAAATCCGTGCTCAGTCTCAAATTCCAAGCAAGGAACC
CATCCATTTTTCAAAAGGTACTCAATTTCACTAAGCAATTGCTCGTCAGACAAATCAGGAAGGTATGAGAGTGTCTCGTACTTCTTCATGTTAAT
TGGTGGCCACACCTGCATGCAGCTAACTCTTCCACCATTGCTAGCAATGGAAGTGATGTCAAGGTTTTGCTTCTTTGTAACAGGGAAAGTGGCTG
AAGATTTGAGACCAGTGAAAGGTGCAACCATGCTAGCTTGTGTAACATTGCTGCGTGTGGCAACAGCTGCTGAAGAATGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E371476] | SGN-U578689 | Tomato 200607 | Build 2 | 989 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T184243 [Download][View] | Facility Assigned ID: FA0AAD17DH10FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.960 | Expected Error Rate: 0.0011 | Quality Trim Threshold: 14.5 |
Working
